| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2113 |
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| Symbol | |
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| ID | 6286828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 2226818 |
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| End bp | 2227834 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642625684 |
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| Product | peptidase U32 |
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| Protein accession | YP_001899679 |
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| Protein GI | 187929192 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.404361 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACAGA ACGCTTCCCC CATTGAACTC GTGGCGCCCG CCGGCAGCCT GGCCGCGCTC
AAGGCCGCGG TGGAAGCCGG GGCCGACTCC GTCTACCTCG GCTTGAAGAA TGCGACCAAC
GCGCGCAACT TCGCCGGCCT GAACTTTACC GAGAGCGACA TCCGCGCCGG CGTCGAATTT
GCGCATCGGA AAGGGCGCCA GGTGCTGTTT GCCATCAACA CGTTTCCGCA GCCTGGCCGT
GCCATCGAGT GGCGCATGGC AATCGATGCT GCCTACATGC TGGGCGCCGA TGCCGTGATC
CTGGCCGACC CCGGGCTGAT GGCCTATGCA TGCGAGCGCT ATCCCAACCT TCGGCTGCAT
CTATCCGTGC AGGGTTCGGC AACGCATGCC GATGCCATCG AGCTGATGCG TGAGCAGTTC
GGCATCCACC GCGCCGTCCT GCCACGCGTG CTGACCTTGA CCGAAGTCGA ACGTGTAATC
CAGCAGACCT CGGCGCAGAT TGAGGTGTTC GGCTTTGGCA GCCTGTGCGT GATGGCTGAA
GGGCGTTGCC TGCTGTCGTC GTATGCCACG GGCGATTCTC CCAATAACAA GGGCGTGTGT
TCGCCCGCGC ATGCGGTGCG CTGGGTGGAG CGCGACGGCA ACCTGGATGC ACGCCTGAAC
AACATCATGA TCGACCAATA CGCACCCGGC GAACCGGCTG GATATCCGAC GCTGTGCAAG
GGGCGCTTTC TCGTCGACGG TGAGGTCGAT CACGCGCTCG AAGAACCCAC GAGCCTCAAT
GCGCTCAGTC TGTTGCCCAG GCTGCTCGCC ATGGGTGTGT CGGCGATCAA GATCGAGGGG
CGCCAGCGCA GTCCGGCGTA CGTTGCGCAG GTGGTGGCCA CATTGCGCGC CGCATTGGAT
GCTGCACAGG CGGACCCGGC GCGCTTCTCG GTCAAGCCCG ATTGGCAGGC CGCACTCGTG
CGCCACGCAG AAGGCGCGCA CGTCACGCAA GGTGCGTTTG ATCGGCCCTG GAAATAG
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| Protein sequence | MTQNASPIEL VAPAGSLAAL KAAVEAGADS VYLGLKNATN ARNFAGLNFT ESDIRAGVEF
AHRKGRQVLF AINTFPQPGR AIEWRMAIDA AYMLGADAVI LADPGLMAYA CERYPNLRLH
LSVQGSATHA DAIELMREQF GIHRAVLPRV LTLTEVERVI QQTSAQIEVF GFGSLCVMAE
GRCLLSSYAT GDSPNNKGVC SPAHAVRWVE RDGNLDARLN NIMIDQYAPG EPAGYPTLCK
GRFLVDGEVD HALEEPTSLN ALSLLPRLLA MGVSAIKIEG RQRSPAYVAQ VVATLRAALD
AAQADPARFS VKPDWQAALV RHAEGAHVTQ GAFDRPWK
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