Gene Rpic_2103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2103 
Symbol 
ID6288189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2218450 
End bp2219298 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content66% 
IMG OID642625674 
Productglutamate racemase 
Protein accessionYP_001899669 
Protein GI187929182 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0796] Glutamate racemase 
TIGRFAM ID[TIGR00067] glutamate racemase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.447396 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.629875 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAC GCGCGCAGGC ACCGGTCGGG GTCTTTGATT CCGGCCTCGG AGGGCTCTCC 
GTCCTGCGCG CGATTCGCGC CGAACTGCCG GCCGAATCGC TTCTCTACCT GGCGGATTCC
CGCCATGCCC CGTACGGGGA AAAATCTCCC GAGTACATTG CCGATCGCAC GCTGCGTGTG
TGCGAATGGC TGGTCGACCA GGGCTGCAAG GCACTGGTGA TCGCGTGCAA CACCGCCACA
GCGCAGGCCG TGCACGTGCT GCGCGAAAAG CTCGCGGTGC CGGTGATTGG CGTCGAGCCG
GGCTTAAAGC CGGCAGTTGC GACGTCGAAG AGCCGTGTGG TCGGCGTGCT CGCGACCGAA
AGCACGCTGC GTAGCGAGAA ATTTGCGCGC CTGCTGGCGG GTGCCTCTGG CGATTGCAAG
GTGCTGAGCC AGCCCGGCTA CGGCCTCGTC CCTCTGATCG AACGCGGCGA TACCCACTCG
CCCGCGGTGC TGGAACTGCT GCGCGCCTAT CTGCAACCGA TGCTCGATGC GAATGCCGAC
ACGTTGGTGC TCGGCTGCAC GCACTACCCC TTCCTGGAAG ATGCCATCCA TGAGATTGCG
GGCGACCGGT TGACATTGAT CGACACCGGA CACGCCGTCG CGCGCCATCT GGGCCGCACG
CTCGCGGCAG CGGGATTGCA GGCATCGGGC CAAGCCGCAA CGCCATGCTT CATGAGCACC
GGCGATGTGC TTCCGCTGCA AGCCATGGTG GCTGCGTTGC TCGGAGAGGC GCCAATGGCC
CAGCGGGTCG ACATTGGCGA CGCGCCCCTG AGCCCCGTCG CGGTGTCGCT CGCTTCCCAG
CCCGAATAA
 
Protein sequence
MTTRAQAPVG VFDSGLGGLS VLRAIRAELP AESLLYLADS RHAPYGEKSP EYIADRTLRV 
CEWLVDQGCK ALVIACNTAT AQAVHVLREK LAVPVIGVEP GLKPAVATSK SRVVGVLATE
STLRSEKFAR LLAGASGDCK VLSQPGYGLV PLIERGDTHS PAVLELLRAY LQPMLDANAD
TLVLGCTHYP FLEDAIHEIA GDRLTLIDTG HAVARHLGRT LAAAGLQASG QAATPCFMST
GDVLPLQAMV AALLGEAPMA QRVDIGDAPL SPVAVSLASQ PE