Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_2103 |
Symbol | |
ID | 6288189 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 2218450 |
End bp | 2219298 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642625674 |
Product | glutamate racemase |
Protein accession | YP_001899669 |
Protein GI | 187929182 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0796] Glutamate racemase |
TIGRFAM ID | [TIGR00067] glutamate racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.447396 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.629875 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACAC GCGCGCAGGC ACCGGTCGGG GTCTTTGATT CCGGCCTCGG AGGGCTCTCC GTCCTGCGCG CGATTCGCGC CGAACTGCCG GCCGAATCGC TTCTCTACCT GGCGGATTCC CGCCATGCCC CGTACGGGGA AAAATCTCCC GAGTACATTG CCGATCGCAC GCTGCGTGTG TGCGAATGGC TGGTCGACCA GGGCTGCAAG GCACTGGTGA TCGCGTGCAA CACCGCCACA GCGCAGGCCG TGCACGTGCT GCGCGAAAAG CTCGCGGTGC CGGTGATTGG CGTCGAGCCG GGCTTAAAGC CGGCAGTTGC GACGTCGAAG AGCCGTGTGG TCGGCGTGCT CGCGACCGAA AGCACGCTGC GTAGCGAGAA ATTTGCGCGC CTGCTGGCGG GTGCCTCTGG CGATTGCAAG GTGCTGAGCC AGCCCGGCTA CGGCCTCGTC CCTCTGATCG AACGCGGCGA TACCCACTCG CCCGCGGTGC TGGAACTGCT GCGCGCCTAT CTGCAACCGA TGCTCGATGC GAATGCCGAC ACGTTGGTGC TCGGCTGCAC GCACTACCCC TTCCTGGAAG ATGCCATCCA TGAGATTGCG GGCGACCGGT TGACATTGAT CGACACCGGA CACGCCGTCG CGCGCCATCT GGGCCGCACG CTCGCGGCAG CGGGATTGCA GGCATCGGGC CAAGCCGCAA CGCCATGCTT CATGAGCACC GGCGATGTGC TTCCGCTGCA AGCCATGGTG GCTGCGTTGC TCGGAGAGGC GCCAATGGCC CAGCGGGTCG ACATTGGCGA CGCGCCCCTG AGCCCCGTCG CGGTGTCGCT CGCTTCCCAG CCCGAATAA
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Protein sequence | MTTRAQAPVG VFDSGLGGLS VLRAIRAELP AESLLYLADS RHAPYGEKSP EYIADRTLRV CEWLVDQGCK ALVIACNTAT AQAVHVLREK LAVPVIGVEP GLKPAVATSK SRVVGVLATE STLRSEKFAR LLAGASGDCK VLSQPGYGLV PLIERGDTHS PAVLELLRAY LQPMLDANAD TLVLGCTHYP FLEDAIHEIA GDRLTLIDTG HAVARHLGRT LAAAGLQASG QAATPCFMST GDVLPLQAMV AALLGEAPMA QRVDIGDAPL SPVAVSLASQ PE
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