| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2098 |
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| Symbol | |
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| ID | 6289832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 2210844 |
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| End bp | 2212907 |
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| Gene Length | 2064 bp |
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| Protein Length | 687 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642625669 |
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| Product | SSS sodium solute transporter superfamily |
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| Protein accession | YP_001899664 |
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| Protein GI | 187929177 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4147] Predicted symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR03648] probable sodium:solute symporter, VC_2705 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.275416 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCCACCG ACTCCCAACA AGACAGCCGC TTTCGCAAGC GGCTGTTTCT GTATTACGGG
CTCTATACCG TAGGGCTGCT GCTCTTCATC GTGATGATGG GCGCGATCGA GCACGTGCGC
GGGCCGGGCG TGTGGCTCGG CTACGTGTTT CTGTTCGTCA CGATTGCCAT CTATGCGTGC
ATCGGGCTGA TCTGCCGCAC GGCCGATCTG ACCGAGTACT ACGTGGCAGG GCGCCGTGTG
CCGGCGTTCT TCAACGGCAT GGCCACCGCG GCTGACTGGA TGAGCGCGGC ATCCTTCATC
GGCCTGGCGG GCATCGTGTT CGCCTCGGGC TATGAAGGCC TCGCCTATGT GATGGGCTGG
ACGGGCGGCT ACTGCCTCGT CGCTTTCCTG CTGGCGCCGT ACCTGCGCAA GTTTGGCGGC
TACACGGTGC CGGATTTTCT CGCCAACCGC TACGGCAACG GGGAGCGGGG CGGCAGTTCT
GTCGTGCGTG GCATTGCGGT GCTGGGGGCG ACGCTGTGTT CGTTCGTCTA CCTCGTCGCG
CAGATCCAGG GTGTGGGGCT GGTGGTCACG CGCTTTATCG GCGTGGAGTT TTCGGTGGGC
GTGTTCTTCG GGCTGGCGGG CATACTGGTG TGCTCGTTCC TGGGGGGCAT GCGCGCCGTG
ACCTGGACCC AGGTGGCGCA GTACATCATC ATGATCGTGT CGTTCCTGGG CGTGGTGTCG
ATCATCGGCT GGCATCGGTA TCACGATCCG GTGCCGCAGT TATCGACGGG TCGCCTGCTG
GTGCAGATCG AGAAAGAGGA GCGGCGCATC GCGCATGACC CTGCCGAGCA GCACGTGCGT
GACCACTTCC TGAACGAAGC TCAGGGGCTG CAGGAGCGTA TCTCGCAGCT GCCGCAGTCG
TTTGACCATG CCCGCGAAGC GCTGAATGCG CAGCTCAAGC TTGCACGCGA ACGCAATGCG
CCACTGCGCG AGATCAAGGC GCTGGAGCGC CAGCGCGAAG AGTTTCCGCC CGATGCGGCC
ACCGCGTCGA TCCTCTGGAA CGAGCAGCGC GAAGACGCGC TGGCGCGCAG CCGTATAGGG
CCGCCATCCA CCGAGCCATT CCCGTCGGCG TCGGAAAACG AGCGCGGCAC CGAGCGGCTG
AACTTCGTGC TGCTGGTGTT TTGCCTGATG GTTGGCACGG CGAGCCTGCC GCACATCCTC
ACGCGCTTTC ACACCACGCC GTCGGTGCGT GAGACGCGCA ACTCGGTGAG CTGGACACTC
GTCTTCGTGG TGCTGCTGTA TGTGTCGGCA CCGGCGCTGG CGGCGCTCGT CAAGCTCGAT
CTGCTGCAGC ACCTCGTGGG TGCGCCGTTT GCGGATCTGC CGCAATGGAT TGTGCCTTGG
CGCAAGGTCG ACCCGCCCGT GTTTGCGCTG CATGACATCA ACGGCGACGG CATCGTGCAG
TGGGCCGAGG TGATGATGCA GCCGGACATG ATCGTGCTGG CCGCGCCCGA GATTGCCGGG
TTGCCGTACG TGTTGTCGGG CCTGATCGCG GCCGGTGCGC TGGCGGCGGC GCTGTCGACT
GCCGATGGCC TGCTGCTGAC CATCGCCAAT GCGCTCTCGC ACGATGTGTA CTTCCACATG
ATCGACAACA CGGCCAGCCA CCAGCGGCGC GTGACGAGCG CCAAGGTAGT GTTGCTGGGC
GTGGCTTTGC TGGCCGCCTA TGTGACGTCA TTGAAGCCGG GCAACATCCT CTTCCTGGTA
GGGGCGGCCT TCTCGCTGGC GGCGTCGTGC TTCTTTCCGG TATTGGTGCT GGGCGTGTTC
TGGAAGCGCA CCAATCGTGC CGGGGCCATC GCGGGCATGC TGACGGGGCT GGCCGTGAGC
GTTTACTACA TCATCGCCAA TTACCCGTTC TTCACGCGCA TGACGGGCCT GCTTGGCCAG
CCGTGGTTTG GTGTCGACCC CATTGCCTCG GGTGCGTTCG GCGTGCCGGC GGGGTTTGTC
GCGGCGATTG TCGTGAGCCT GCTGACCAAG CCGAACCGGC CGGTGGTCGA CAAACTCGTC
GGCTACCTTC GCGATCCGCT GTAA
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| Protein sequence | MATDSQQDSR FRKRLFLYYG LYTVGLLLFI VMMGAIEHVR GPGVWLGYVF LFVTIAIYAC
IGLICRTADL TEYYVAGRRV PAFFNGMATA ADWMSAASFI GLAGIVFASG YEGLAYVMGW
TGGYCLVAFL LAPYLRKFGG YTVPDFLANR YGNGERGGSS VVRGIAVLGA TLCSFVYLVA
QIQGVGLVVT RFIGVEFSVG VFFGLAGILV CSFLGGMRAV TWTQVAQYII MIVSFLGVVS
IIGWHRYHDP VPQLSTGRLL VQIEKEERRI AHDPAEQHVR DHFLNEAQGL QERISQLPQS
FDHAREALNA QLKLARERNA PLREIKALER QREEFPPDAA TASILWNEQR EDALARSRIG
PPSTEPFPSA SENERGTERL NFVLLVFCLM VGTASLPHIL TRFHTTPSVR ETRNSVSWTL
VFVVLLYVSA PALAALVKLD LLQHLVGAPF ADLPQWIVPW RKVDPPVFAL HDINGDGIVQ
WAEVMMQPDM IVLAAPEIAG LPYVLSGLIA AGALAAALST ADGLLLTIAN ALSHDVYFHM
IDNTASHQRR VTSAKVVLLG VALLAAYVTS LKPGNILFLV GAAFSLAASC FFPVLVLGVF
WKRTNRAGAI AGMLTGLAVS VYYIIANYPF FTRMTGLLGQ PWFGVDPIAS GAFGVPAGFV
AAIVVSLLTK PNRPVVDKLV GYLRDPL
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