Gene Rpic_2090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2090 
Symbol 
ID6289583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2200531 
End bp2202828 
Gene Length2298 bp 
Protein Length765 aa 
Translation table11 
GC content67% 
IMG OID642625660 
Productaldehyde oxidase and xanthine dehydrogenase molybdopterin binding 
Protein accessionYP_001899656 
Protein GI187929169 
COG category[C] Energy production and conversion 
COG ID[COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.759301 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCGA AGACTACAAA ACCGCGCAGC GGACGCCGCC GTTTCCTGCT CGGCGCACTC 
GGCATTGGTG GCGCACTGGT AGTCGGTTGG GGTGTGATGC CGCCGCGCAG CCGCGTGGGC
GATCCGGGCA TCTTCCCCGA GCACAACGGC GAGATTGCCC TCAACGGCTG GATCAAGATC
ACGCCCGAAG GCAACGTCGT GCTTGCCATG CCGCGCGTGG AGATGGGCCA GGGCATCCAC
ACTGCGCTGT CGATGCTGGC AGCCGAAGAG CTGGACATTC CGCTCGCGCG CGTGCGCATC
GAAAGCGCGC CCGTGGAGCG CATCTACGGC AACGTCGTCG CCATGGGCGA CAGCTCGCTG
CCGCTGCATC CCGATAGCGC AGACAAGACC TGGGCACGCG CACTGCACTG GATCATGGCC
AAGAGCGCGC GCGAGATCGG CCTCATCATT ACCGGCGGCA GCAGCAGCAC CGCCGATGGC
TGGCAGCCCG TGCGCGAGGC CGCCGCCACG GCGCGTGCGG CGCTGGTGGA AGCCGCGGCG
CGCGAATGGA ATGCGCCAGT TGCGCAAGTC AGCATCCGTG AAGGCCAGTT GATCGGCCCC
GGCGGCAAGC AGTCCACGTT TGGCGAGATG GCCAAATCGG CGCGTGGTCT CTCTGCGCCG
TCCAACGTGA CGCTCAAGCC GGCCTCGCAA TTCCAGTTGA TCGGCAAACC GGCGCCGCGC
AACGATCTCG CCGCGAAGAC GGATGGCAGC GCGCGCTTCT CCATCGACAC GCGCCTGCCC
GGCATGTTGT ATGCCGCTGT CGTGATGTGT CCGGCGTTTG GCGGCAAGCT CAAGACGTTC
CAGTCGAAAG CGGCGCTTGG CATGCCGGGC GTGCGTTACG TGGTGCCGTT CGAGGGCACG
GGCGGTGGTG CGCCGGGCGT GGCCGTGGTG GCAGACCATT ACTGGCAGGC CCGGCAGGCG
CTGGCAACGC TTGAGCCCGT GTGGGACAAC GGCCCGCATG CCAAGCTCGA CTCCGCGGGC
ATTCGGCAGC AGCTTGTCAG CGCCCTCGAC AGTGACAAGG GCGGCTTCAC GTATCGATCG
ATGGGCGACG GCCTGAAAGC CTTCGACAAG GCTGATGGCG CCACCCTCGT CGAGGCCGAA
TACAGCGCGC CGTATCTCGC GCACGCCACG ATGGAACCGA TTAACTGCAC CGCGCAGGTG
ACGCCGGAAG GCGTGCATCT CTGGGCGCCC ACGCAGGTCG CCACGCTGGC GCAGCTTGTG
GCGGCGCGTG CGGCAGGTGT CAGCGGCGAC AAGGTGCAGA TCGATATCCC GCTCATCGGC
GGCGGTTTCG GGCGGCGGCT GGAATCGGAT TTCATCGGTC AGGCCGTCAC CATCGCCACC
AAGACCGACG GCAAGCCCGT GCAGGTCATC TGGTCGCGCG AAGAAGACGT CCGCCACGAC
TTCTATCGCC CGCACGCCAT CGCCCGGCTC AAGGCGCGTG TCGAGAACGG CAAGGTCACC
GCGATTGCCT CGCGCAGCGC CGGCCAATCG ATTCTCGCGG GCGAACTGGA CCGTCTGTTC
GGTGCGCCGT CAGTGGGCAT CGATCGCTAC ACCGCTGAAG GCCTGTTCGA CCTGCCGTAC
GAAATCGAGC ACGAGCACAT CGCGCACCTG GCAGTCGATC TGCCGGTTCC CGTAGGCTTC
TGGCGCAGCG TGGGGCATTC GTACAACGGG TTCTTCATGG AGGGCTTTCT CAACGAGGTG
GCGGCCGCGG CCAAGCTTGA CCCGTTGGCG ATGCGGCGTG ACTTGCTGAA GGACCATCCG
CGCGAGCTGA AGGTGCTGGA CACGGCAGCG CAGGCCGCCG GCTGGGGGCA GCCGCTGGCA
CCAGCCGCTG ACGGCGCACC GCGTGCGCGC GGCATTGCGC TGCACCCGAG CTTCGGCTCC
GTGGTCGCGC AGGTGGTGGA GGTGTCGATG AAAGACGGCA AGCCACGCGT GCATCGCGTT
GTGTGCGCAG TCGATTGCGG CACGGTGGTC AACCCGGGCA TCGTTGCGCA GCAGATGGAA
AGCGCGGTCA TCTTTGGCCT GACGGCGGCG CTGTATGGCC GGATCGACAT CAAGGACGGC
CAGGTCGTGC AGTCGAACTT CCCCGATTAC CCGGCGCTCA AGATGGCAGA GACGCCCGTC
ATCGAAACGC ACATCGTACC CAGCACGGCA GAACCCAGCG GCATGGGCGA GGTGGGTGTG
CCGCCAATCG GGCCGGCCGT GGCCCATGCC GTGGCGCAGT TGACGGGCAA ACCGGTGAGG
CAGTTGCCAA TGGCGTGA
 
Protein sequence
MNAKTTKPRS GRRRFLLGAL GIGGALVVGW GVMPPRSRVG DPGIFPEHNG EIALNGWIKI 
TPEGNVVLAM PRVEMGQGIH TALSMLAAEE LDIPLARVRI ESAPVERIYG NVVAMGDSSL
PLHPDSADKT WARALHWIMA KSAREIGLII TGGSSSTADG WQPVREAAAT ARAALVEAAA
REWNAPVAQV SIREGQLIGP GGKQSTFGEM AKSARGLSAP SNVTLKPASQ FQLIGKPAPR
NDLAAKTDGS ARFSIDTRLP GMLYAAVVMC PAFGGKLKTF QSKAALGMPG VRYVVPFEGT
GGGAPGVAVV ADHYWQARQA LATLEPVWDN GPHAKLDSAG IRQQLVSALD SDKGGFTYRS
MGDGLKAFDK ADGATLVEAE YSAPYLAHAT MEPINCTAQV TPEGVHLWAP TQVATLAQLV
AARAAGVSGD KVQIDIPLIG GGFGRRLESD FIGQAVTIAT KTDGKPVQVI WSREEDVRHD
FYRPHAIARL KARVENGKVT AIASRSAGQS ILAGELDRLF GAPSVGIDRY TAEGLFDLPY
EIEHEHIAHL AVDLPVPVGF WRSVGHSYNG FFMEGFLNEV AAAAKLDPLA MRRDLLKDHP
RELKVLDTAA QAAGWGQPLA PAADGAPRAR GIALHPSFGS VVAQVVEVSM KDGKPRVHRV
VCAVDCGTVV NPGIVAQQME SAVIFGLTAA LYGRIDIKDG QVVQSNFPDY PALKMAETPV
IETHIVPSTA EPSGMGEVGV PPIGPAVAHA VAQLTGKPVR QLPMA