| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2087 |
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| Symbol | |
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| ID | 6287533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 2196417 |
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| End bp | 2197985 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642625657 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_001899653 |
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| Protein GI | 187929166 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.159106 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.621098 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAACGCC TCCTAGCCTC GTCGCTTGCC GTCGCGCTGT TTGCCGCTGC CGGCGCTGCC
GGCGCGCAGA CGCTGAACAT TGCCTTTGCC GATCCGCTGT CGTCGCTCGA CCCGCAGTTG
AACAATCACG CAGGCGACCG CTCCGTCGAC GTGCACTTCT GGGATCTGCT GGTCGAGAAC
AAGTGGAACC AGCTGCAGCC CGGCCTGGCG CTGTCGTGGA GGACGCTGGA CCCGAAGACG
TGGGAATTCA AGCTGCGCCC GAACGTGAAA TGGCACGACG GCCAGCCGTT CACGGCGGAT
GACGTCATCT TCTCGTACCA GCGCGCGCGC AGCGTGCCGG GCAGCGTGGC AACGTTCGCG
GGCTATCTGC GCACGGTGGA GTCCGTCACG GCCAAAGACC CGCTGACGCT GATCATCAAG
ACGAACATCC CGAACCCGGA CTTGCCGCTG AACCTCGCGT CCGTGCACAT CGTCAGCAAG
CATGTGGGTG AGAAGTCGTC GACTGAGGAC TACAACGCGG GCCGCGCCGT GGTGGGCACC
GGCCCCTACA AGTTCGTCTC GTATGTGCCG GGCGATCGCG TGGTGATGGC GCGCAACGAC
AACTACTGGG GCGGCAAACA GCTCTGGGAG AAGGTCAACT ACCGCTACAT CAACAATGCT
GCCGCGCGCA CGGCCAACCT GCTCTCAGGC GAGGTGGATG TCATCGACAA GGTGTCGGTG
TCTGACCTGG CGCGCCTGCG CCAGTCGCCC AACGTGAAGG TGTTTTCCTA TCCGGGCTTG
CGTGTGATGC TGTTGCAACC GAGCTTCCGC AAGGGGCCGA ACGATTACGT CACCGGCAAC
GACGGCAAGC CGCTGCCGAA CAATCCGCTG CTGGATGTGC GCGTGCGCCG TGCGCTGTCG
CTGGCCATCG ACCGCAAGGC CATTGTCGAC CGCATCCTGC AAGGCGCCGC CACTGTCGCC
AACCAGTGGA TGCCGTCGAA CACGTACGGC TACAACCCCG ACGTGAAGGA TATCGCCTAC
GACCCGGCGC AGGCCAAGAA GCTGCTGGCC GATGCGGGCT TTCCGCAGGG CTTCAACCTC
GTGATGCACG TGCCGAATGA TCGCTACCCG CAAGGCCCCG AAACGGCGCA GGCGGTGGCG
CAGTTCTGGA CGCGCATCGG CGTGAAGGCG CGCGTGGAAG TGGTGCCCTG GTCGGTCTAC
TCGGGCCGCG CCAACAAGAA TGAATATGCG ATGAGCATGC TGGCGTGGGG CAACGGCACG
GGCGAAGCAA GCTACGCGCT TGTCAACGTG CTGGCCACCG TCGATACCAA GAAGGGTCTG
GGCGCATCCA ACTGGGGCCA CTACAGCAAC GCGGCTGTCG ACAACGCGTT GAACGCCTCC
ACCGAGGAAT TCAACGTGGA AAAGCGCGCG GCCATTCTTC GCCACTCCGT CAAGCTGGTC
TCGGATGACG TGGGCGTGAT GCCGCTGTAC CACTACCAGA ACGTGTGGGC CGCCAAAAAA
GGCCTGAAGG TGACGCCGAT GACGAGCGAT CGCACCGCGG CCCAGATGGT CACCAAGGAC
GGCAAGTAA
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| Protein sequence | MKRLLASSLA VALFAAAGAA GAQTLNIAFA DPLSSLDPQL NNHAGDRSVD VHFWDLLVEN
KWNQLQPGLA LSWRTLDPKT WEFKLRPNVK WHDGQPFTAD DVIFSYQRAR SVPGSVATFA
GYLRTVESVT AKDPLTLIIK TNIPNPDLPL NLASVHIVSK HVGEKSSTED YNAGRAVVGT
GPYKFVSYVP GDRVVMARND NYWGGKQLWE KVNYRYINNA AARTANLLSG EVDVIDKVSV
SDLARLRQSP NVKVFSYPGL RVMLLQPSFR KGPNDYVTGN DGKPLPNNPL LDVRVRRALS
LAIDRKAIVD RILQGAATVA NQWMPSNTYG YNPDVKDIAY DPAQAKKLLA DAGFPQGFNL
VMHVPNDRYP QGPETAQAVA QFWTRIGVKA RVEVVPWSVY SGRANKNEYA MSMLAWGNGT
GEASYALVNV LATVDTKKGL GASNWGHYSN AAVDNALNAS TEEFNVEKRA AILRHSVKLV
SDDVGVMPLY HYQNVWAAKK GLKVTPMTSD RTAAQMVTKD GK
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