Gene Rpic_2074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2074 
SymbolpurU 
ID6286914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2183555 
End bp2184421 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content62% 
IMG OID642625644 
Productformyltetrahydrofolate deformylase 
Protein accessionYP_001899640 
Protein GI187929153 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0788] Formyltetrahydrofolate hydrolase 
TIGRFAM ID[TIGR00655] formyltetrahydrofolate deformylase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.437396 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCACT CCGGTTTCAT TCTTACCCTG TCGTGCCCGG ACCAGCCTGG CATCGTCCAC 
GCGGTGTCGG GCCTGCTGTT TGAGCAAGGC TGCAACATTC TCGATTCGGA CCAGTTCGGC
GACGAATTCA CCGGCCGTTT CTTCATGCGC GTGCATTTTG TGCCGCAGGG GCAACCGCTT
GATCTCGCTA CGCTGCGCGA CTGCTTTGCG CCCATCGGCG AACGTTTCTC CATGCAGTGG
GGCATGTTCG ACGCCGCAGC CAAGCCGCGC GTGATGATTC TCGTCTCGAA GATCGGCCAC
TGCCTGAACG ACCTGCTGTT CCGTGCCCGC GCCGGCCAAC TTCCGATCGA GATTGCGGCC
ATCGTCTCGA ACCACCGCGA TTTCTACCAA CTGGCTGCGT CGTACGACGT GCCGTTCATG
CACCTGCCCT TGCTGCAGGC GACGGACGCG CAGAAGGCCC AGCAGGAAGC CCGCATCTGG
GAAATCGCGC AGGAGCAGCA GATCGACCTG GTGGTGCTCG CGCGCTATAT GCAGATTCTT
TCCGACAATC TGTGCCGCAA GCTCGAAGGC CGCGCCATCA ACATCCACCA CTCGTTCCTG
CCGAGCTTTA AGGGCGCCAA GCCGTATTAC CAGGCGCACG AGCGCGGTGT GAAGCTGATC
GGCGCAACGG CCCATTACGT GACGGCCGAC CTGGACGAAG GCCCGATCAT CGAACAGGAA
ATCGAGCGCG TGGACCACAG CATGGACCCG GAGCAGCTCA CCGCCGTCGG CCGCGACGTG
GAGTGCGTGG CGCTGGCCCG CGCCGTGAAG TGGCATGCGG AACACCGCAT CCTGCTCAAC
GGCCACAAGA CCGTCGTCTT CAAGTAA
 
Protein sequence
MSHSGFILTL SCPDQPGIVH AVSGLLFEQG CNILDSDQFG DEFTGRFFMR VHFVPQGQPL 
DLATLRDCFA PIGERFSMQW GMFDAAAKPR VMILVSKIGH CLNDLLFRAR AGQLPIEIAA
IVSNHRDFYQ LAASYDVPFM HLPLLQATDA QKAQQEARIW EIAQEQQIDL VVLARYMQIL
SDNLCRKLEG RAINIHHSFL PSFKGAKPYY QAHERGVKLI GATAHYVTAD LDEGPIIEQE
IERVDHSMDP EQLTAVGRDV ECVALARAVK WHAEHRILLN GHKTVVFK