Gene Rpic_2049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2049 
Symbol 
ID6288956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2157454 
End bp2158716 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content61% 
IMG OID642625618 
Producthypothetical protein 
Protein accessionYP_001899615 
Protein GI187929128 
COG category[S] Function unknown 
COG ID[COG2718] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.390338 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCACGA TCATTGATCG GCGGGAGAAC GGTGGCGGCA AGAGCACCGT CAACAAGCAA 
CGCTTCATCA AGCGTTACCG AGACCAGATC CGCCGCGCGG TGGCCAAGGC CGTGACGGGC
CGCAAGATCA TGGACATCGA GCAGAGCGGG CAGGTGTCCA TTCCCGTCAA GGACATCTCG
GAGCCCATGT TCCACCACGG CTCGGGCGGA CGCCGCGAAG GCGTCCACCC GGGTAACAAG
GAGTTCATTC GCGGCGACAG CTTCGACCGC CCGCAGCAGG GCAGCGGCGG TTCCGGCTCC
CAGGCCAGCG ACTCGGGCGA GGGCGAAGAC GATTTCATCT TCACGCTCTC GCGCGAGGAC
TTTCTCAACT TCTTCTTCGA AGACATGGCG TTGCCCGATC TTGCCAAGCG CAGCCTGGCC
AAGATCGCGG AGGTGCGCAA GGTGCGCGCG GGTTTCTCGC TCGATGGCAC GCCGTCCAAC
CTGTCGATTC TGCGTACGAT GCGCAGCTCG CTCGGTCGCC GTATCGCGTT GTCCAGCCCG
TATCAGCGTC GTCTGCACGA GTTGGAACGC GAGTACAACG AAGAACTGGA AAACGACGGC
CCTTACAGCG TGCGCGCGCA AGAGCTGATG AAGGAGATGC GCCATCTGCG CTCCTGCCTG
GATCGCGTGC CGTTCATCGA GAAGCTCGAC CTGCGCTACA ACAACCGCGT ATTGCGCAAG
CGCCCGCAGG CGCAGGCGGT GATGTTTTGC GTGATGGACG TGTCCGGCTC GATGGACGAA
TCGCGCAAGG ACTTGGCCAA GCGCTTCTTC ATGCTGCTCT ACCTGTTCCT GAAGCGGAAC
TACGAACGCA TCGACGTCGT CTTCATCCGT CACCACACCG TGGCCAAGGA GGTGGACGAA
GAGGACTTCT TCCACTCACG CGAGTCGGGT GGCACTGTTG TGTCGAGCGC ACTCAAGCTG
ATGGCGGAAG TGATGCAGGA GCGCTATTCG CCAAGCCAAT GGAACATCTA TTGTGCGCAG
GCTTCGGATG GTGACAACTG GGCGGGCGAT TCTGAGCTGT GCGCGAAGCT GCTGCGTGAA
ACGATCCTGC CGTTGACGCA GTATTACGCC TATGTTGAGG TGGTCTCGAC GGAGCCCCAG
AACCTGTGGG AGGAGTATCT TACGTTGAAG GCTGGGCACG ACAACTTCGC GATGCAGCGC
ATTCTCAAAG CGGACGAAAT CTATCCGGTG TTGCACGAGC TGTTTCAGAA GCGCGCCGCC
TGA
 
Protein sequence
MGTIIDRREN GGGKSTVNKQ RFIKRYRDQI RRAVAKAVTG RKIMDIEQSG QVSIPVKDIS 
EPMFHHGSGG RREGVHPGNK EFIRGDSFDR PQQGSGGSGS QASDSGEGED DFIFTLSRED
FLNFFFEDMA LPDLAKRSLA KIAEVRKVRA GFSLDGTPSN LSILRTMRSS LGRRIALSSP
YQRRLHELER EYNEELENDG PYSVRAQELM KEMRHLRSCL DRVPFIEKLD LRYNNRVLRK
RPQAQAVMFC VMDVSGSMDE SRKDLAKRFF MLLYLFLKRN YERIDVVFIR HHTVAKEVDE
EDFFHSRESG GTVVSSALKL MAEVMQERYS PSQWNIYCAQ ASDGDNWAGD SELCAKLLRE
TILPLTQYYA YVEVVSTEPQ NLWEEYLTLK AGHDNFAMQR ILKADEIYPV LHELFQKRAA