Gene Rpic_2048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2048 
Symbol 
ID6288955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2155828 
End bp2157336 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content60% 
IMG OID642625617 
ProductSpoVR family protein 
Protein accessionYP_001899614 
Protein GI187929127 
COG category[S] Function unknown 
COG ID[COG2719] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0996469 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTATC TATCTACGGG CTCGGAGTGG ACCTTCGAGC TGATCAGGCG CTACGACCAA 
AGCATCGCCC AGATTGCCGC AGACTTCGGC CTGGACACCT ATCCGAACCA GATCGAAATC
ATTACCGCCG AGCAGATGCT CGATGCCTAC GCGTCGTCCG GCTTGCCGCT GGGCTACAAC
CATTGGTCAT ACGGCAAGCA CTTCCTGGCG TCCGAACGCG GCTACCAGCG CGGCCTCATG
GGGCTGGCTT ACGAGATCGT CATCAATTCG AACCCCTGCA TCGCCTACCT GATGGAGGAG
AACACGATGC CGATGCAGGC GCTGACGATC GCACATGCCT GCTATGGCCA CAACTCCTTC
TTCAAGGGCA ATTACCTGTT CCGCACGTGG ACGAACGCCG ACGCGATCGT CGATTACCTG
CTTTTCGCCA AGAACTACGT GGCCGAATGC GAGCAGCGCT ACGGCGAGCA GGAGGTGGAA
CTGCTGCTCG ACTCCTGCCA CGCATTGCAG AACTACGGGG TCGATCGTTA TCGGCGGCCG
AAGAAGCTGT CGATCAACGA AGAGCAGGCG CGCCAGGCGG AGCGGGAGAA ATACCTGGAA
GCGCAGGTGA ACGACCTGTG GCGCACGCTG CCGACGCACC GCGCTCGCGC GCTCGCAACG
GCCGACGACA TACCGGAACC CGATCCGCAA TTCCCGCCGG AACCGGAAGA GAACCTGCTG
TACTTCATCG AGAAGAACGC GCCCAAGTTG CAGCCATGGC AACGAGAAAT CGTGCGCATC
GTGCGCAAGA TCGCGCAGTA CTTCTATCCG CAGCGGCAGA CCAAGGTGAT GAATGAAGGC
TGGGCGACGT TCTGGCACTA CACCATCCTG CACAAGCTGT ACGACGAAAA ACTCGTCAAC
GACGCCTTCA TGCTCGAGCT GCTGCAGGCC CACACCAACG TGATCTATCA GCCGCCATTC
AACAGCCCGT ATTACAGCGG CCTGAACCCG TACACGCTGG GCTTTCTGAT GTTCCAGGAC
ATTCGGCGCA TCTGTGAATC GCCGGAAGAG GAAGACTACC GCTGGGCGCC CGAAATCGCG
GGCAGCGATT GGCAGAAGAC GCTCGACTTC GCCATGCGCA ACTTCAAGGA CGAGAGCTTC
CTCTTGCAAT TCCTCTCGCC GCGCGTGATC CGTGAGTTGA AGCTGTTCTC CGTGCTCGAT
GACGACCGCG ATGCCAAGCT GCGCGTCACC GCCATCCACG ACGAGGATGG CTATCGCAAG
ATCCGAGAGT TGTTGGCAGG GCAGTATGAC TTGTCGAACA TCGAGCCCAA CATCCAGGTG
ACCAACGTCG ACGTGGGTGG AGATCGCTCA TTGACGCTGC GCCACTTGCA GAGCAGCCGT
CGCCCGCTCG GGTCGAACTA CGAAGAGATG CTGCGCCACG TCGTACGCCT GTGGGGCTTC
ACGTGCCGGC TGGAGGTGGT CTACGAAGAT GGGCGCCGCG AGATGAAGCA CGAGTGCAGG
CCTGACTAG
 
Protein sequence
MAYLSTGSEW TFELIRRYDQ SIAQIAADFG LDTYPNQIEI ITAEQMLDAY ASSGLPLGYN 
HWSYGKHFLA SERGYQRGLM GLAYEIVINS NPCIAYLMEE NTMPMQALTI AHACYGHNSF
FKGNYLFRTW TNADAIVDYL LFAKNYVAEC EQRYGEQEVE LLLDSCHALQ NYGVDRYRRP
KKLSINEEQA RQAEREKYLE AQVNDLWRTL PTHRARALAT ADDIPEPDPQ FPPEPEENLL
YFIEKNAPKL QPWQREIVRI VRKIAQYFYP QRQTKVMNEG WATFWHYTIL HKLYDEKLVN
DAFMLELLQA HTNVIYQPPF NSPYYSGLNP YTLGFLMFQD IRRICESPEE EDYRWAPEIA
GSDWQKTLDF AMRNFKDESF LLQFLSPRVI RELKLFSVLD DDRDAKLRVT AIHDEDGYRK
IRELLAGQYD LSNIEPNIQV TNVDVGGDRS LTLRHLQSSR RPLGSNYEEM LRHVVRLWGF
TCRLEVVYED GRREMKHECR PD