Gene Rpic_2043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2043 
Symbol 
ID6286776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2152406 
End bp2152858 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content65% 
IMG OID642625612 
ProductLysozyme 
Protein accessionYP_001899609 
Protein GI187929122 
COG category[R] General function prediction only 
COG ID[COG3772] Phage-related lysozyme (muraminidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACTG AGCACAACCC ACGCACCACC GGCGAGCGAG GCCTCGCGCT GATCAAGGAA 
TCGGAAGGGC TGCGTCTGTC GACGTATCTG GATGCGGTCG GTAAGCCGAC CATCGGCTAC
GGCCATTTGA TCCGGCCTGG CGAGACCTTC AACGGGCCGA TCTCGCAGCA GCATGCCGAA
GCGCTGCTGC GCAAAGACCT GGCCGACACC GAGCAGGGCA TTGCGAAGGC AGTGCGTGTG
TCGATCACGC AAGGGCAGTT CGACGCGCTG GCGTCCTTCG TCTTCAACCT GGGAGCGGGG
CGGCTGCGCT CGTCGACGCT GCTGCGCAAG CTCAACGCCG GGGACTACGT CGGCGCAGCC
AACCAGTTCC TGCTCTGGGA CAAGGCCGGC GGCAAGCCGC TCAAAGGGCT GACGAAGCGT
CGTCAGGCCG AACGCAAGCT GTTCCTGTCC TGA
 
Protein sequence
MSTEHNPRTT GERGLALIKE SEGLRLSTYL DAVGKPTIGY GHLIRPGETF NGPISQQHAE 
ALLRKDLADT EQGIAKAVRV SITQGQFDAL ASFVFNLGAG RLRSSTLLRK LNAGDYVGAA
NQFLLWDKAG GKPLKGLTKR RQAERKLFLS