Gene Rpic_2037 details

Gene Information

• Locus tag: Rpic_2037
• Symbol: prpE
• ID: 6288454
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia pickettii 12J
• Kingdom: Bacteria
• Replicon accession: NC_010682
• Strand: -
• Start bp: 2145873
• End bp: 2147774
• Gene Length: 1902 bp
• Protein Length: 633 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 642625606
• Product: propionyl-CoA synthetase
• Protein accession: YP_001899603
• Protein GI: 187929116
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
• TIGRFAM ID: [TIGR02188] acetate--CoA ligase; [TIGR02316] propionate--CoA ligase

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 36
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCCCATGT CCGCCGCGTA CCGCGCGCTG TATCAGCGCT CCATTGATGA CCCCGCTGGC 
TTCTGGGGCG AACAGGCCCA GCGCATCGAA TGGCAGGGGC CGTATTCTGC CGTCCTGGAC 
GATTCGCGCT TGCCATTCGC AAAGTGGTTC GTGGGCGGAC GCACCAACCT GTGCCACAAC 
GCCGTCGACC GGCATCTCGC CACGCGTGGC GAGCAGGCGG CGCTCGTGTA TGTCTCCACT 
GAAACCGGTC TGGAGGCCAC GTACACGTAT CGCCAGCTCC ATCGCGAGGT CAACCGCATG 
GCGGCGAGCC TGCAGGCCCT GGGCGTGAGG CGGGGCGACC GCGTGCTGAT TTACCTGCCG 
ATGATTCCTG AAGCCGCGTT TGCGATGCTG GCCTGTGCGC GCATCGGCGC GATCCATTCG 
GTGGTGTTCG GCGGTTTCGC GTCCAACAGT CTCGCCACGC GCATCGACGA CGCTACGCCG 
CGCGTGATCG TCAGTGCCGA TGCGGGCTCG CGAGCGGGCA AGGTGGTCGA GTACAAACCG 
TTGCTCGATG CCGCGATTGC GCTGGCGGCC CACAAGCCCG AGCGCGTGCT GCTCGTCAAT 
CGCCAACTCG CGCCCATGCA GCACAACCCG CGCGATGTCG ACTACGCAAC GCTCGCCGCC 
CAGCACGCGA ATGCCGATGT GCCGTGCGAG TGGATGGAAT CCAGCGAGCC CTCGTACATC 
CTCTACACCT CCGGTACGAC GGGCAAACCG AAAGGTGTCC AGCGCGACAC CGGCGGCTAT 
GCGGTGGCGC TCGCGGCGTC GATGCCGCTC ATTTTCGGTA CGCAGCCCGG CGACACGATG 
TTCACCGCTT CGGACGTGGG CTGGGTGGTG GGACACAGCT ACATCGTCTA CGCGCCGCTG 
CTCGCGGGCC TGACGACGGT CATGTACGAA GGCACGCCAA TCCGTCCCGA CGGTGCGGTC 
TGGTGGCGCA TCGTCGAGCA ATATCGGGTG AACGTGATGT TTACCGCACC GACCGCCATT 
CGCGTACTCA AAAAGCAGGA TCCGGCGCTG CTGCAGCGAC ATGATCTGTC GAGCCTGCGC 
CGCCTCTTCC TTGCCGGCGA GCCGCTGGAC GAGCCCACCG CAAGCTGGAT CGGCGAGGCA 
CTGCACAAGC CCATCGTCGA CAACTACTGG CAGACAGAGA CCGGCTGGCC GATGCTGGCC 
ATTCCGCAAG GGGTTGAGCC TTCCATGCAA AAGCTCGGCT CGCCGGGTTT CCCGGTCTAT 
GGCTACAAGC TCGACATCCT GGACGAGGCC ACCGGCGAAC CCTGCGCCCC CGGCGAGAAG 
GGGCTCCTCG CCGTTGCCGC GCCGCTGCCG CCGGGCTGCA TGACGACCGT CTGGGGCGAC 
GATGCCCGCT TTCTGCAGAC ATACTGGTCT GCGTTCCCGG GCCGGCACAT CTATTCGAGC 
TTCGACTGGG GTGTGCGCGA CGAGGAGGGT TACGTGACCA TCCTCGGCCG CACCGACGAC 
GTCATCAACG TGGCGGGCCA CCGTCTGGGC ACCCGCGAGA TCGAAGAAAG CCTGTCGTCG 
CATCCCGCCA TCGCCGAGGT GGCGGTGGTG GGCGTGGCCG ATCAGCTCAA AGGGCAGGTG 
GCGATGGGGT TTGCCATCGT GCGTGACGCT TCGCGCATTG CCGAGCCGAC GGGGCGCCTG 
GCCCTCGAAG GTGAGTTGAT GCGCACAGTC GAGGTGCAGC TCGGGGCAGT GGCACGGCCC 
TCGCGCGTGT TCTTTGTCGG GGCGCTGCCC AAGACGCGCT CCGGAAAGCT GCTGCGCCGG 
GCGATGCAGG CCGTAGCGGA AGGGCGTGAC CCGGGAGATC TGACGACCAT TGAAGACCCC 
ACGGCGCTGG CTCAGGTGCA GGCTGCCGTG CGAGGTGACT AG 

 

Protein sequence

MPMSAAYRAL YQRSIDDPAG FWGEQAQRIE WQGPYSAVLD DSRLPFAKWF VGGRTNLCHN 
AVDRHLATRG EQAALVYVST ETGLEATYTY RQLHREVNRM AASLQALGVR RGDRVLIYLP 
MIPEAAFAML ACARIGAIHS VVFGGFASNS LATRIDDATP RVIVSADAGS RAGKVVEYKP 
LLDAAIALAA HKPERVLLVN RQLAPMQHNP RDVDYATLAA QHANADVPCE WMESSEPSYI 
LYTSGTTGKP KGVQRDTGGY AVALAASMPL IFGTQPGDTM FTASDVGWVV GHSYIVYAPL 
LAGLTTVMYE GTPIRPDGAV WWRIVEQYRV NVMFTAPTAI RVLKKQDPAL LQRHDLSSLR 
RLFLAGEPLD EPTASWIGEA LHKPIVDNYW QTETGWPMLA IPQGVEPSMQ KLGSPGFPVY 
GYKLDILDEA TGEPCAPGEK GLLAVAAPLP PGCMTTVWGD DARFLQTYWS AFPGRHIYSS 
FDWGVRDEEG YVTILGRTDD VINVAGHRLG TREIEESLSS HPAIAEVAVV GVADQLKGQV 
AMGFAIVRDA SRIAEPTGRL ALEGELMRTV EVQLGAVARP SRVFFVGALP KTRSGKLLRR 
AMQAVAEGRD PGDLTTIEDP TALAQVQAAV RGD