Gene Rpic_2035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2035 
Symbol 
ID6288682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2143695 
End bp2144369 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content64% 
IMG OID642625604 
Productleucine export protein LeuE 
Protein accessionYP_001899601 
Protein GI187929114 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID[TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCT TCATGCTCGC CCACTTCGGC ATCACCGAGT TCTGGACCTT TCTGCTCGGC 
ACGATTTTCA TCGTGCTGCT GCCGGGGCCG AATTCGATGT ACGTGCTGTC GGTGGCGGCC
CGCCGCGGTG TGCGCGCGGG CTACCAGGGC GCGTGCGGCG TGTTTCTGGG TGATGCCATC
CTGATGGTGT TGTCGGCAGC GGGCGTGGCT TCGCTGTTGA AGGCGAGTCC GGCGCTGTTC
TACGTCGTGA AGTACATCGG CGCGGCGTAT CTGGCGTGGA TCGGCCTGCA GATGCTGCGT
GGCGCGGTTC GCAACTGGCG TGTGCGCAAG GCCGGCGAGT CCGTCGCACA AGACGCGGCT
CCGGCCGATG AATCGCACCC GTTCAAGAAG GCGCTGATCA TCAGTCTGCT GAACCCGAAG
GCGATCCTGT TCTTCATCTC GTTCTTCATC CAGTTCGTCG ATCCGCACTA CGCGCTGCCG
GCGGTGTCGT TCGTCGTGCT GGGGCTGGTC TGCCAGATCT GCAGCTTCCT GTACCTGACC
ACCATCATCT TCGTGGGCGC GCGGCTGGCC GCGGCGTTCC GCGCGCGACG ACGTTTGTCT
GCCGGTATGA GCAGCGGCGT CGGCGCCATG TTTATCGGCT TTTCCGCCAA GCTGGCGACG
GCCACACTGA ATTAA
 
Protein sequence
MNAFMLAHFG ITEFWTFLLG TIFIVLLPGP NSMYVLSVAA RRGVRAGYQG ACGVFLGDAI 
LMVLSAAGVA SLLKASPALF YVVKYIGAAY LAWIGLQMLR GAVRNWRVRK AGESVAQDAA
PADESHPFKK ALIISLLNPK AILFFISFFI QFVDPHYALP AVSFVVLGLV CQICSFLYLT
TIIFVGARLA AAFRARRRLS AGMSSGVGAM FIGFSAKLAT ATLN