| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2030 |
|---|
| Symbol | |
|---|
| ID | 6287438 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 2137937 |
|---|
| End bp | 2138602 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642625599 |
|---|
| Product | ribosomal RNA methyltransferase RrmJ/FtsJ |
|---|
| Protein accession | YP_001899596 |
|---|
| Protein GI | 187929109 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0293] 23S rRNA methylase |
|---|
| TIGRFAM ID | [TIGR00438] cell division protein FtsJ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAGA ACAAGTTTAA CCAGTCGTGG CTGCACGACC ATATCAACGA TCCGTACGTC
AAGCTGGCGC AGCGCGAAGG CTATCGCGCA CGTGCCGCCT ACAAGCTCAA AGAGATCGAC
GAGCAGGACA AGTTGATCAA GCCGGGCCAG GTCATCGTTG ACCTGGGTGC CGCGCCGGGC
AGTTGGAGCC AGTACGTGCG CAACAAGCTG GCGGCCTCGC CGCGCGCCAA GGATGGACGT
ATCGACGGCG CGATCGTCGC CATCGACATC CTGCCGATGG AAGCCATCGC CGACGTTACC
TTCATCCAGG GTGACTTCCG CGAGGACGAG GTATTCCGGC AACTGGAAGA AATCGTGCTG
GAAGTCAGCG GTGGCGGCAA AGTGGACCTT GTTTTGTCCG ATATGGCCCC CAATCTCTCA
GGTGTGGCGT CGGCAGACGC CGCGCGCATG GAGCACATCG CCGAGCTGGC AGTGGAATTT
GCCATGGCGC ACCTGAAACC TGAAGGCGCG CTGCTGATCA AATGTTTCCA CGGCAGCGGC
TATAGTCAGA TCGTCGAGAT GTTCAAGCGT CATTTCAAGA TCGTGGCGCC GCGCAAGCCG
AAAGCCTCCC GTGACAAATC GTCCGAGACA TTCTTGTTGG GCCGCCAGCT CAAGCATCCG
GGCTGA
|
|---|
| Protein sequence | MAKNKFNQSW LHDHINDPYV KLAQREGYRA RAAYKLKEID EQDKLIKPGQ VIVDLGAAPG
SWSQYVRNKL AASPRAKDGR IDGAIVAIDI LPMEAIADVT FIQGDFREDE VFRQLEEIVL
EVSGGGKVDL VLSDMAPNLS GVASADAARM EHIAELAVEF AMAHLKPEGA LLIKCFHGSG
YSQIVEMFKR HFKIVAPRKP KASRDKSSET FLLGRQLKHP G
|
|---|
| |