Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_2004 |
Symbol | |
ID | 6286841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 2111888 |
End bp | 2112904 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642625573 |
Product | 1-aminocyclopropane-1-carboxylate deaminase |
Protein accession | YP_001899571 |
Protein GI | 187929084 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2515] 1-aminocyclopropane-1-carboxylate deaminase |
TIGRFAM ID | [TIGR01274] 1-aminocyclopropane-1-carboxylate deaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.876567 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTGC AGCGATTTCC CCGCTATCCC CTGACGTTCG GCCCGACGCC CATCCAGCCG CTGAAACGAT TGAGCGCGCA CCTGGGCGGC AAGGTGGAGT TGTTTGCCAA GCGCGAAGAC TGCAACAGCG GCCTGGCCTT CGGCGGCAAT AAAACGCGCA AGCTGGAATA CCTGATCCCG GAAGCGCTGG AAGGCGGGTA CGACACGCTG GTGTCCATTG GCGGCATTCA GTCGAACCAG ACGCGCCAGG TGGCCGCCGT GGCGGCGCAC CTCGGTCTGA AGTGCGTGCT GGTGCAGGAA AACTGGGTGA ACTACTCCGA CGCCGTGTAC GACCGCGTCG GCAATATCGA GATGTCGCGG ATCATGGGCG CCGATGTGCG CCTCGATTCT GCGGGCTTCG ACATCGGCAT CCGGCCCAGT TGGGAGCAGG CCATGGACGA CGTGCGCAAG CGCGGCGGCA AGCCGTTCCC GATTCCGGCC GGCTGCTCCG AACACCCGCT TGGCGGACTG GGCTTTGTGG GCTTTGCTGA GGAAGTGCGC CAGCAGGAAG CGGAGCTGGG CTTCAAGTTC GACTACATCG TGGTGTGCTC GGTCACGGGC AGCACGCAGG CCGGCATGGT CGTCGGCTTT GCGGCGGATG GCCGGGCCGA TAAGGTGATC GGCATCGATG CCTCGGCCAA GCCGGAACAG ACGCGCGCGC AGATTCTCCG CATTGCGCAG CACACCGCCG AGCTGGTCGA CCTCGGCCGC AACATCACCG AAAGGGACGT GGTGCTCGAC ACGCGCTATG GCGGCCCGGA ATACGGCCTG CCCAACGAAG GCACGCTTGA AGCGATTCGC CTGTGCGCGC GCCAGGAAGC CATGCTGACC GACCCGGTGT ACGAGGGGAA ATCCATGCAC GGCATGATCG ACATGGTGCG CAACGGTGAA TTTCCTGCGG GCTCGCGCGT GCTCTACGCA CATTTAGGCG GTGTGCCGGC ACTCAACGCG TACAGCTTCA TCTTCCGCAA CGGTTGA
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Protein sequence | MNLQRFPRYP LTFGPTPIQP LKRLSAHLGG KVELFAKRED CNSGLAFGGN KTRKLEYLIP EALEGGYDTL VSIGGIQSNQ TRQVAAVAAH LGLKCVLVQE NWVNYSDAVY DRVGNIEMSR IMGADVRLDS AGFDIGIRPS WEQAMDDVRK RGGKPFPIPA GCSEHPLGGL GFVGFAEEVR QQEAELGFKF DYIVVCSVTG STQAGMVVGF AADGRADKVI GIDASAKPEQ TRAQILRIAQ HTAELVDLGR NITERDVVLD TRYGGPEYGL PNEGTLEAIR LCARQEAMLT DPVYEGKSMH GMIDMVRNGE FPAGSRVLYA HLGGVPALNA YSFIFRNG
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