Gene Rpic_2001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2001 
Symbol 
ID6289376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2109099 
End bp2109569 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content62% 
IMG OID642625570 
Producttranscriptional regulator, AsnC family 
Protein accessionYP_001899568 
Protein GI187929081 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.295064 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCCA TTGACCGCGA ACTACTGAGG CTGTTGCAGG CCGATGCGAC GCTGCCCATC 
GCAGAGCTTG CGCAGCGCGT GAACCTCTCC CAAACACCGT GCTGGAAGCG GGTGCAGCGA
CTCAAGGACA CGGGCGTCAT CCGCGCCCAG GTGGCGCTGT GCGACGCACG CAAGCTGGGC
GTCGGCACCA CGGTATTCGT GGCCGTGCGC ACCGATCAAC ACACCGAGAA ATGGGCGCAG
CGTTTCACGC AGGTGGTGCG CGATATGCCC GAGGTGGTGG AGGTCTACCG GATGAGCGGC
GAGATGGACT ATCTGCTGCG TGTGGCGGTG GCGGGCATTG AAGATTACGA CCGCGTGTAC
AAACACCTCA TCAAGTCCGT TCCGCTGTCG GATGTGAGCT CATCGTTTTC GATGGAGCAG
ATCAAGTATT CGACTGCGCT GCCGGTGCGG GATGGGGGGC AGGGGGATTG A
 
Protein sequence
MDAIDRELLR LLQADATLPI AELAQRVNLS QTPCWKRVQR LKDTGVIRAQ VALCDARKLG 
VGTTVFVAVR TDQHTEKWAQ RFTQVVRDMP EVVEVYRMSG EMDYLLRVAV AGIEDYDRVY
KHLIKSVPLS DVSSSFSMEQ IKYSTALPVR DGGQGD