Gene Rpic_1994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1994 
Symbol 
ID6289852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2103653 
End bp2104984 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content63% 
IMG OID642625562 
Productribonuclease BN 
Protein accessionYP_001899561 
Protein GI187929074 
COG category[S] Function unknown 
COG ID[COG1295] Predicted membrane protein 
TIGRFAM ID[TIGR00765] YihY family protein (not ribonuclease BN) 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.20518 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTTTG ACACCCGTGC GCTTCGCAAA TGGAATGCCG CCAAGCTGCG TGCGCTGGCG 
CGTTACGCCT TGCGCCGCGC CGGTGAAGAC CACCTGCCGC AAGTGGCTGG TAGCCTGACA
TTCACGACGG TGCTGTCGTT GGTTCCGATT TTGACGGTGG CGTTTGCGCT GTTCACGGCA
TTCCCGATGT TCAAGAGCTT CCGGGCGGAC ATCGAAGGCT ACATGTTCAG CAACCTCGTG
CCGGGCAGCA TCAGTCGGCC GATCCTGACG TATCTGAATC AGTTTTCCAC CAACGCCAAG
GGGCTGACGG CAGCGGGCCT GATCGGCCTG GTCGTGACGT CGGTAATGAC ATTGCTCACC
GTCGAGAACG CATTGAACGC GATCTGGCGC GTGCGTCATC GTCGGCCGCT GGCGCATCGC
GTCCTGGTGT TCTGGGCGCT GATGACATTT GCGCCGGTGC TGATTGGCGC GAGCCTGTCG
GTCAGTTCGT ACCTCGTGTC GATTTCGGCG GGCTATGTGC ACAAGCTGCC GTTTGGTCTG
GGCGTGATCG TCAGCCTGGT CCCGATCCTG CTGTCGGCGA TTGCATTTGC GATGCTCTAC
GTATTCGTGC CGAATACCAA CGTGGAACGG CGCGATGCGT TCATTGCCGG CCTGATTGCC
GCCGGGGCAT TTGAAATCGC CAAGCGCGTC TTTGGCGCTT ACGTCGCGCA TATCCCCACC
TACACGGCCG TCTACGGCGC GTTTGCCACG CTGCCGATCT TCCTGACGTG GATCTATGTG
AGCTGGCTGG TGACGCTGCT CGGTGCGACC ATCGCCTCGA CGCTGCCGAT CATCCGGCAG
GGCTACTGGC AGCGGCGCAC ATTTCCGGGC AGCGAGTTCT TTGATGCGCT GGGTGTTCTG
TTGCTGCTGT ATCGCGCGCG AGAACAGGCG CCGCGTACGG TCGCCGAGCG CGATATTGGC
CGGCGCCTGC AGTTGGAAGC CGATTACCTG GTTGACCTGC TGACCAAGCT GAAGGCACTG
CACCTGATCG GCAAGCTGCA GCAGGATCGC GGTGAGACCC ACTGGGCGCT GCTGTGCGAT
GTGCACACGA CCACGCTGCG GCCGCTCTAT GAAAGGCTGG TGTTGAATCT GCCGCGCTTG
CCGCGCACTG CCTTGGCGCG CCATCTGGGT GACACGCGCG CGCTGGTCAG CCAACTGCAG
AATCCCGCGC TCGACGCCAC GCTCGAGAGC ATTTTCACGA CTGGCGAACG CGGGGTGGCG
GCGGCTGCGC AGGCTGCTAT GGCACCGGCG CCGGCTTCAG CAGTGCCCGC CGCTGCCAAC
GCGAGCGCCT GA
 
Protein sequence
MLFDTRALRK WNAAKLRALA RYALRRAGED HLPQVAGSLT FTTVLSLVPI LTVAFALFTA 
FPMFKSFRAD IEGYMFSNLV PGSISRPILT YLNQFSTNAK GLTAAGLIGL VVTSVMTLLT
VENALNAIWR VRHRRPLAHR VLVFWALMTF APVLIGASLS VSSYLVSISA GYVHKLPFGL
GVIVSLVPIL LSAIAFAMLY VFVPNTNVER RDAFIAGLIA AGAFEIAKRV FGAYVAHIPT
YTAVYGAFAT LPIFLTWIYV SWLVTLLGAT IASTLPIIRQ GYWQRRTFPG SEFFDALGVL
LLLYRAREQA PRTVAERDIG RRLQLEADYL VDLLTKLKAL HLIGKLQQDR GETHWALLCD
VHTTTLRPLY ERLVLNLPRL PRTALARHLG DTRALVSQLQ NPALDATLES IFTTGERGVA
AAAQAAMAPA PASAVPAAAN ASA