Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1989 |
Symbol | |
ID | 6287453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 2098466 |
End bp | 2100373 |
Gene Length | 1908 bp |
Protein Length | 635 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642625557 |
Product | phospholipid/glycerol acyltransferase |
Protein accession | YP_001899556 |
Protein GI | 187929069 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAAT CGAGCCAGTT TTCCCTGCTG AAGCAGCTTC GCTTTGCACC GTTCTTCTGG ACCCAGTTCC TGGGCGCGAT GAACGATAAC GTTTTCAAGG TGGCGTTTTC CTCGTTGGTC ACGTACCACG CTGCGCTGTT CGGCAATGCG GACCCGGCGT CCGCAGCGTT CCTGATTTCA GCGATCTTCA TCGCGCCGTT TGTGCTGCTG TCTGCCACCA GCGGGCAGAT TGCCGACCGC ATGGACAAGG CGCGCCTGAT CCGTCTGGTG AAGACATTGG AAATCGCCAT CATGGTGATC GGCTGTGCAG GTTTCGCGCT GCGCCACGTT GAACTGCTGT ACCTCTGCAC GTTCTTGATG GGCGTGCACT CGACGCTGTT TGGGCCCGTG AAGTACGCCT ATCTGCCCCA GCATCTGCAA TCGGCTGAAT TGGTGGGCGG CAACGGGCTG GTGGAAATGG GCACCTTTGT CGCCATCCTG ATCGGCACCA TTGGCGGCGG CGAACTGGCC AATTACACCC GCAACGGCGA GCTGGTCGGC CCGCTGTTTA CCGGTATTGC GTGCATTGTC ATTGCCGTGG CCGGGTGGCT GACCGCGCGC GGTGTGCCCG TCTCGCCGGC GTCGCAGCCG GACCTGCGCA TCAATTGGAA CCCGATCTCC GAGACCTGGC GCAACCTGAA GCTGGCGAGC AACCAGCGCG CGGTGTTTCT CAGCCTGCTG GGCATCTCGT GGCTCTGGTT CGTGGGCGCG ACGTTCCTGA CGTCGTTCTT TGCCTACGCG CGCAATGTGC TCGGCGGCGA CCAGAATGTC GTGACGCTAC TGCTGGCCGT GTTTTCGGTG GGCATCGGGT TGGGCTCGGT GCTGTGCGAA AAGCTCTCGG GCCGCACGGT GGAGATCGGC CTGGTGCCGT TTGGCTCGAT CGGCATGACG GTCTTCGCGG TGGACCTGTA CTTTGCTTCG CATGCCGAGG CATTGGTCGC GCACGACGTG CTGACGGGCA TTTCCGGGTT CCTGCAGAAC CATCGCCATT GGCGCGTGCT GGCCGATCTG TTCCTGCTGG CGATGTTCGG CGGCTTCTAC AGCGTGCCCT TGTACGCGCT GATCCAGAGC CGCTGCGAAC CGACGCATCG TGCGCGCATC ATTGCCGCCA ACAACATCCT CAACGCGCTG TTCATGATCG CTTCTGCCGT GCTGGCGATG GTGCTCACGC GTGCCGGGTT CACGATCCCG CAGTTATTTC TGGTCACCGG CATCCTCAAT GCCGTGGTGG CGATCTACAT CTACACGCTG GTGCCGGAAT TCCTGATCCG CTTCGTGATG TGGCTGCTGA TCCATACCGT TTACCGCGTG AAGGTGGAGG GCTCGGAGCA GATTCCCGAT GAAGGCCCCT GCCTGCTGGT CTGCAACCAC GTGAGCTTCG TCGATGCCGT GGTGGTGGGC GCGTTCGTGC GCCGCCCCGT GCGTTTTGTG ATGGATCACC GCATCTTCAA GGTGCCGGTG CTGTCGTGGT TCTTCAGCAC GGTCAAGGCG ATTCCGATTG CGCCGATGCA CGAAGACCCG GAGATGCTCA GCCGCGCCTA CGACACCATT GCCGCCGCGC TGGCGGAGGG CGAGGTCGTC TGCATCTTCC CCGAAGGCAA GATCACCGGC ACGGGCGAGA TGAACCCGTT CAAGGAAGGC ATGCGCCGCA TCATCGAACG CACACCCGTG CCGGTGGTAC CGATGGCGCT GCGCGGCCTC TGGGGCAGCT TTTTCTCGCG CAAGGGCGGG GCGGCGATGT CGCGCCCGTT CCGTCGCGGC TTCCTCAACA AGCTGGAACT GTGCATCGGC ACGCCGGTGC CGGCGCAGGC CGTGTCGCTG GAAGCGATGC AGGCCGCCGT GCTGGCGTTG CGCGGCGAGC GGCTCTAG
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Protein sequence | MSQSSQFSLL KQLRFAPFFW TQFLGAMNDN VFKVAFSSLV TYHAALFGNA DPASAAFLIS AIFIAPFVLL SATSGQIADR MDKARLIRLV KTLEIAIMVI GCAGFALRHV ELLYLCTFLM GVHSTLFGPV KYAYLPQHLQ SAELVGGNGL VEMGTFVAIL IGTIGGGELA NYTRNGELVG PLFTGIACIV IAVAGWLTAR GVPVSPASQP DLRINWNPIS ETWRNLKLAS NQRAVFLSLL GISWLWFVGA TFLTSFFAYA RNVLGGDQNV VTLLLAVFSV GIGLGSVLCE KLSGRTVEIG LVPFGSIGMT VFAVDLYFAS HAEALVAHDV LTGISGFLQN HRHWRVLADL FLLAMFGGFY SVPLYALIQS RCEPTHRARI IAANNILNAL FMIASAVLAM VLTRAGFTIP QLFLVTGILN AVVAIYIYTL VPEFLIRFVM WLLIHTVYRV KVEGSEQIPD EGPCLLVCNH VSFVDAVVVG AFVRRPVRFV MDHRIFKVPV LSWFFSTVKA IPIAPMHEDP EMLSRAYDTI AAALAEGEVV CIFPEGKITG TGEMNPFKEG MRRIIERTPV PVVPMALRGL WGSFFSRKGG AAMSRPFRRG FLNKLELCIG TPVPAQAVSL EAMQAAVLAL RGERL
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