Gene Rpic_1988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1988 
Symbol 
ID6287452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2097957 
End bp2098370 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content65% 
IMG OID642625556 
ProductPeptidylprolyl isomerase 
Protein accessionYP_001899555 
Protein GI187929068 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACACG TTTCCCCGCT GCTGTGTGCT TCGTTGCTTG CCCTGGCTGC CGTTAGCGCG 
CAAGCCGCAT CGCCCGCATC CGAGACGCTG CCTTCCGGTG TGATCGTCCA GACGCTGACC
AAAGGCACCG GCCCGTCGCC CAAGGCCAGC GACACGGTCA AGGTGCACTA CCGCGGCACG
CTCACCAACG GTACCGAGTT CGACAGCTCC TACAAGCGCG GCCAGCCGAT CTCCTTCCCG
CTGAATCGCG TGATTCCGTG CTGGACCGAA GGCGTGCAGA AGATCCAGGT GGGCGGCAAA
GCCAAGCTGA CGTGCCCGGC AGCCACTGCT TACGGCGAGC GCGGCGTGCC GGGCACGATT
CCGCCCAACT CCACGCTGAA CTTTGACGTC GAGCTGCTGG GTATCGGTGG CTGA
 
Protein sequence
MKHVSPLLCA SLLALAAVSA QAASPASETL PSGVIVQTLT KGTGPSPKAS DTVKVHYRGT 
LTNGTEFDSS YKRGQPISFP LNRVIPCWTE GVQKIQVGGK AKLTCPAATA YGERGVPGTI
PPNSTLNFDV ELLGIGG