| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1978 |
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| Symbol | |
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| ID | 6288558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 2087482 |
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| End bp | 2089707 |
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| Gene Length | 2226 bp |
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| Protein Length | 741 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642625546 |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_001899545 |
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| Protein GI | 187929058 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.699321 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGAACA AGACCGAACG GCCGGCCGAG TTGCCCGGAT CGACGGCAGA GCAGGTCGCT
CGGGCGATCG AATACCTCGC GGCCAATGCC GCAGACAGCG TCACGCTGAC CGGCGAGCCG
CTGGAGTCGC ATGCGCGCGG CACGATCGCC ATCCTTGAAG GGTTGCGTGT CGACACGCCG
TCGTTGCAGG CGGCCGCGCT GTTTCTGTTG CCCACGCTGG CAATGGACAG CGAAAAGGCG
CTCGAGCCTG CATTCGGTGC CGAGGTCGTC AAGCTCGTGC ACGACGTGCG GCAACTGCTG
CGCATTGGCG CGATTGCGGG CCTCGTCAGC CCGACCGATG CCAGCATTAC GCGCAAGAAC
GAAGCCGAAG CACGCCGCGC GCAAGTCGAG GCGTTGCGCA AGATGTTGCT CGCGTTCGCG
CAAGACATTC GCGTGGTGAT GATCCGCCTG GCGTCGCGGT TGCAGTCGCT TCGCTGGCTG
GCCCAGACGA AGCGGTCGGC GCCGGAAGGC ATGGCGCGCG AGACGCTGGA TATCTACGCG
CCGCTCGCAA ACCGCCTGGG CATCTGGCAG CTGAAGTGGG AGCTTGAAGA CCTCGGCTTC
CGCTTTGAGG ATCCCGATAC CTATAAGCGC ATCGCGCGCC TGCTGGACGA AAAGCGCATC
GAGCGCGAGA AGTTCATCGG CCAGGCCATC GAGCAACTCC AAAAGACATT GCACGATGCC
GGCATTCAGG CTGAGGTCAG CGGTCGGCCC AAGCACATCT ACAGCATCTG GAAGAAGATG
CGAGGCAAGG AACTGGACTT TGCCGATCTG TACGACGTGC GCGCCTTCCG TGTCATCGTC
GACGACATCA AGGATTGCTA CACGGTGCTC GGTTTCGTGC ACCACATGTG GCAGCCGATC
CCGAAAGAGT TCGACGACTA CATCTCACGC CCAAAGGCCA ACGGCTACAT GTCGCTGCAC
ACGGTGGTGA TCGGCGACGA CGGCCGTGCG CTCGAGGTGC AGATTCGCAC GCGCGAGATG
CACCACTTTG CCGAGTACGG CGTGGCTGCG CACTGGCGCT ACAAGGAGGC GGGCAACAAG
GGCTACGCCG GCCAGTTCTC TGCCAGCGAG CGCTACGACG AGAAGATCGC GTGGCTGCGC
CAGTTGCTCG CCTGGAAAGA TGACGCCGAG CACACCGTCG CGCACGAGGA TTCGCCGTGG
GAGCAGCTCA AGCACACCGA GCTGGATGAC CACATTTACG TGCTGACGCC GCAGGCGCGC
GTGATCGCGT TGCCGCAAGG TGCGACGCCC GTCGATTTTG CGTATTACCT GCATAGCGAT
CTCGGCCACC GCTGCCGCGG CGCGCGCGTC GACGGCACGA TGGTGCCGCT GAACACGCCG
CTCAAGAACG GCCAGACCGT CGAGATTGTT ACCGTCAAGC ACGGCGGGCC GTCACGTGAT
TGGCTGAACA CCGAGCTGCA CTATCTTGTC AGCCCGCGCG CCCGCACGAA AGTGCGCGCG
TGGTTCAACG CGATGGAACT GGAAGAGACG CTCGCGCAGG GCCGGGCGCT TATCGACAAG
ACGCTGCAGC GTGAGGGCAA GACCGCCGTC AACCTGGAAG AACTGGCCGC CAAGCTCGGC
TACAAGACGT CGGACGATCT CTATGCCGTG GTCGCCAAGG ACGAACTGAG CCTGCGCCGC
ATCGAGGCCG TTTTGCGCTC GGATGGGGCG CCGCCGCCCG CGCCCGTCGA CGACGAAGCG
GCCATCACCA AGAAGAGCCG CGCCACCAGC GTGGCTCGTG GCGCCAAGAG CGGCGTGCTC
GTGGTGGGCG TCGATTCGCT CCTCACGCAG ATGTCGCGTT GCTGCAAGCC GGCACCGCCG
GACCCCATCG TTGGTTTTGT CACGCGTGGG CGCGGCGTAT CGATCCACCG TCAGAGCTGC
GCGACCTTTC AGCAACTGGC TGCCCGGGCG CCCGGCCGTG TAATCCAGAC GGAATGGGGC
CAGCGCAGCG ATTCGGTCTA TCCGATCGAC ATCCAGGTCG AGGCGCTGGA CCGGCAGGGA
TTGTTGCGTG ACATCTCGGA AATCCTCTCG CGCGAGAAGA TCAACGTGAC CGGCGTGCGC
ACGCTGTCGA GCAAAGGCGT CGCAAAAATG CAGTTCACCG CGGAGGTGGC AGAGGCGACA
CAGCTGCAGC GCGCGCTGAC TTTGATCGAA GAGGTGCAGG GGGTGTTGAC AGCTCGAAGG
AAGTGA
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| Protein sequence | MENKTERPAE LPGSTAEQVA RAIEYLAANA ADSVTLTGEP LESHARGTIA ILEGLRVDTP
SLQAAALFLL PTLAMDSEKA LEPAFGAEVV KLVHDVRQLL RIGAIAGLVS PTDASITRKN
EAEARRAQVE ALRKMLLAFA QDIRVVMIRL ASRLQSLRWL AQTKRSAPEG MARETLDIYA
PLANRLGIWQ LKWELEDLGF RFEDPDTYKR IARLLDEKRI EREKFIGQAI EQLQKTLHDA
GIQAEVSGRP KHIYSIWKKM RGKELDFADL YDVRAFRVIV DDIKDCYTVL GFVHHMWQPI
PKEFDDYISR PKANGYMSLH TVVIGDDGRA LEVQIRTREM HHFAEYGVAA HWRYKEAGNK
GYAGQFSASE RYDEKIAWLR QLLAWKDDAE HTVAHEDSPW EQLKHTELDD HIYVLTPQAR
VIALPQGATP VDFAYYLHSD LGHRCRGARV DGTMVPLNTP LKNGQTVEIV TVKHGGPSRD
WLNTELHYLV SPRARTKVRA WFNAMELEET LAQGRALIDK TLQREGKTAV NLEELAAKLG
YKTSDDLYAV VAKDELSLRR IEAVLRSDGA PPPAPVDDEA AITKKSRATS VARGAKSGVL
VVGVDSLLTQ MSRCCKPAPP DPIVGFVTRG RGVSIHRQSC ATFQQLAARA PGRVIQTEWG
QRSDSVYPID IQVEALDRQG LLRDISEILS REKINVTGVR TLSSKGVAKM QFTAEVAEAT
QLQRALTLIE EVQGVLTARR K
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