Gene Rpic_1972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1972 
SymbolpheT 
ID6286271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2080110 
End bp2082539 
Gene Length2430 bp 
Protein Length809 aa 
Translation table11 
GC content64% 
IMG OID642625539 
Productphenylalanyl-tRNA synthetase subunit beta 
Protein accessionYP_001899539 
Protein GI187929052 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0072] Phenylalanyl-tRNA synthetase beta subunit 
TIGRFAM ID[TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATTTC CGGAATCCTG GCTTCGCAGT TTCGTCAATC CGTCGATCAC CACGGATGAA 
CTCTCCCATC GCCTGACGAT GGCTGGCCTC GAGGTGGAAG AGGTCGACCC CGTTGCGCCG
CCGTTCTCGC AGATCGTTGT CGGCCATGTG GTCGAGGTGA ACAAGCATCC GGACGCCGAT
CGCCTCAACG TGTGTAAGGT CGATGCCGGC ACGGGCGAAC TGCTGCAGAT CGTCTGCGGC
GCGCCGAACG TGTCGGTGGG CATCAAGGTG CCGTGCGCGA TGGTCGGCGC CGAGTTGCCG
CCCGGCGAAG ATGGCAAGCC GTTCAAGATC AAGATCGGCA AACTGCGTGG CGTGGAGAGC
TACGGCATGC TGTGTTCGGC GCGCGAGCTG AAGCTGTCGG AAGACCACGG CGGACTGCTG
ATCCTGCCGG AAGACACGCC GGTGGGCGAG GACATCCGCA AGGTGCTCGA TCTGGACGAC
CAGGTCTTCA TCATTAAGCT CACGCCGAAC AAGGCCGACT GCCTGTCGAT CCATGGTGTG
GCGCGTGAAG TGTCCGCGCT GACGGGCGCG CCGATCACGA TGCCGTCGAT GGCGCCCGTG
GCGGTGACGC TGGCTGACAG GCTGCCCGTC AAGGTTGTGG CGCCGGACCT GTGCGGCCGC
TTTTCGGGTC GCATCATCCG CGGCGTGAAT GCACACGCGA AGACGCCGGC CTGGATGGTG
TCGCGCATCG AGCGCGCAGG CATGCGCAGC GTGTCGGCGC TGGTCGATAT TTCGAATTAC
GTGATGCTGG AGCTGGGCCG TCCGTCGCAC GTGTTCGACC TGGACAAGAT CCACGGCGGC
CTGACGGTGC GCTGGGGCAA GGCTGGCGAA CAGCTGAAGC TGCTCAACGG CGACACCATC
ACCGTCGACG AAAAGGTCGG CGTGATCTCG GACGAGCAGG CCATTGAAAG CCTCGCCGGT
ATCATGGGCG GCGACAAGAC GGCCGTCACG CTCGATACGC AGAACATCTA CGTCGAAGCC
GCATTCTGGT GGCCGGAAGC CATCCAGGGC CGCGCGCGCC GCTACAACTT CTCGACCGAT
GCGGGCCATC GCTTCGAGCG CGGCGTTGAC TATGCGACCA CCGTTGAACA CATCGAGCGC
ATCAGCGCGC TGATCCTCGA AATCTGCGGC GGCCAGGCTG GCCCGATCGA CGATCAGATC
GTCAACTTGC CGAAGCGCGA GCCGGTGCGC ATGCGCGTTG CACGTGCTGC GCGCGTGCTC
GGTATTCCGC TGTCGCACGA CGTCGTGGCG GACGTGTTCA AGCGCCTCGG CCTTACGTTC
AGCGTGGACG GCGATGTGTT CATCGTCGAG CCGCCGTCGT ACCGCTTCGA CTTGGAAATC
GAGGAAGACC TGATCGAAGA GGTCGCCCGT ATCTATGGTT TCGAGCGGAT TCCCGCCAAG
CCGCCCGTGG CCGAGAGCGC GATGCGCCCG ACCGACGAGG CACGCCGGAC GATGCACGAC
GTGCGTCACG CCGTTGCCGC GCGCGATTAC CACGAGGTCG TCAACTTCGC CTTTGTCGAG
GCGGAATGGG AAGCCGACTT TGCCGGCAAC ACCAATCCGA TTCCGCTGTT GAACCCGATT
GCCAGCCAGT ACTCGGTGTT GCGCAGCACG CTCATCGGCG GCTTGCTCGA CAAGGTGCGC
TACAACGTGA ACCGCAAGGC TTCGCGCGTG CGCTTGTTCG AGGTGGGACG TGTGTTCCAC
CGTGATGCAG ACGTCGCCGA CGGTGGTCTG TCGATCGCGG GCTACGCACA GCCGATGATG
GCGGGCGGCA TTGCGTATGG TCCGTCCAAG GAAGAGCAGT GGGGCGTGCA GACACGCCCG
GTTGATTTCT TCGATGTGAA AGGCGATGTC GAGTCACTGC TGTGGCCGCT GAAGGCGCGC
TTCGAGCGCG CTGAGCATCC CGCGCTGCAT CCGGGACGCT CCGCGCGCGT GGTGCTGAAT
GGCCGCGCCG TCGGCTGGAT TGGTGAGCTG CATCCGCGTT GGCTGCAGAA GTACGATTTG
CCGACTGCGC CGGTGGTGTG GGAAGTGGAG CTCGACGCCA TCACCGCGGT GGGTCTGCCG
AAGTATCGGG AAGTGCCGCG TGTGCCGGCT GTGACGCGCG ACATCGCGCT GGTCGTGCGG
CAGGATGTGG CGGTGCAGGA TCTGGTCGAC ACGTTTGAGA AAGCGGCTGT CGGCGCGCCG
TGGCAGCGTT ATCTGCAGGG CGTTGTGCTG TTCGATGAAT TCCGTCCGAA GGCCGCCACG
GCTGCCATTG GGGCGCAGGA GAAAAGCCTT GCCTTCAGAA TTACGTTGCA AGATACTGAC
AGCACCCTTC AGGACGACAT TGTCGAGGCC GCCACACAGC AACTGATTCG AGCGGCCGGC
GATGCATTCG GCGCGCGCCT GCGCGGCTGA
 
Protein sequence
MQFPESWLRS FVNPSITTDE LSHRLTMAGL EVEEVDPVAP PFSQIVVGHV VEVNKHPDAD 
RLNVCKVDAG TGELLQIVCG APNVSVGIKV PCAMVGAELP PGEDGKPFKI KIGKLRGVES
YGMLCSAREL KLSEDHGGLL ILPEDTPVGE DIRKVLDLDD QVFIIKLTPN KADCLSIHGV
AREVSALTGA PITMPSMAPV AVTLADRLPV KVVAPDLCGR FSGRIIRGVN AHAKTPAWMV
SRIERAGMRS VSALVDISNY VMLELGRPSH VFDLDKIHGG LTVRWGKAGE QLKLLNGDTI
TVDEKVGVIS DEQAIESLAG IMGGDKTAVT LDTQNIYVEA AFWWPEAIQG RARRYNFSTD
AGHRFERGVD YATTVEHIER ISALILEICG GQAGPIDDQI VNLPKREPVR MRVARAARVL
GIPLSHDVVA DVFKRLGLTF SVDGDVFIVE PPSYRFDLEI EEDLIEEVAR IYGFERIPAK
PPVAESAMRP TDEARRTMHD VRHAVAARDY HEVVNFAFVE AEWEADFAGN TNPIPLLNPI
ASQYSVLRST LIGGLLDKVR YNVNRKASRV RLFEVGRVFH RDADVADGGL SIAGYAQPMM
AGGIAYGPSK EEQWGVQTRP VDFFDVKGDV ESLLWPLKAR FERAEHPALH PGRSARVVLN
GRAVGWIGEL HPRWLQKYDL PTAPVVWEVE LDAITAVGLP KYREVPRVPA VTRDIALVVR
QDVAVQDLVD TFEKAAVGAP WQRYLQGVVL FDEFRPKAAT AAIGAQEKSL AFRITLQDTD
STLQDDIVEA ATQQLIRAAG DAFGARLRG