| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1971 |
|---|
| Symbol | ihfA |
|---|
| ID | 6286270 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 2079615 |
|---|
| End bp | 2080031 |
|---|
| Gene Length | 417 bp |
|---|
| Protein Length | 138 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642625538 |
|---|
| Product | integration host factor subunit alpha |
|---|
| Protein accession | YP_001899538 |
|---|
| Protein GI | 187929051 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
|---|
| TIGRFAM ID | [TIGR00987] integration host factor, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGATC AACACGCGCC TGCATTGGCA GCCTCCTTGG ACGACTCGCT CGGTTCCTCT
TCGTCTGCTC TGGCCGACGC GCGTGATGCG CGCGGTCAGG ATGTGCCGAC GCTTACCAAG
GCCGAGCTTG CCGAGATGCT GTTCGAGCAG GTCGGCTTGA ACAAGCGTGA ATCGAAGGAC
ATGGTCGAAG CGTTTTTCGA CGTGATTCGC GAGGCGCTCG AGCAGGGTGA CAGCGTCAAG
CTGTCTGGCT TCGGCAACTT CCAGTTGCGC GACAAGCCGC AGCGCCCGGG CCGAAATCCG
AAGACGGGCG AGATCATTCC CATCACCGCG CGTCGCGTCG TTACGTTCCA CGCGAGCCAA
AAGCTCAAGG CGCTCGTTGA AGAGCGCGTC GAGCCGCTGC CGGTCGACAT CGGGTAA
|
|---|
| Protein sequence | MNDQHAPALA ASLDDSLGSS SSALADARDA RGQDVPTLTK AELAEMLFEQ VGLNKRESKD
MVEAFFDVIR EALEQGDSVK LSGFGNFQLR DKPQRPGRNP KTGEIIPITA RRVVTFHASQ
KLKALVEERV EPLPVDIG
|
|---|
| |