| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1966 |
|---|
| Symbol | |
|---|
| ID | 6287107 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 2076524 |
|---|
| End bp | 2076859 |
|---|
| Gene Length | 336 bp |
|---|
| Protein Length | 111 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642625532 |
|---|
| Product | alkylhydroperoxidase like protein, AhpD family |
|---|
| Protein accession | YP_001899533 |
|---|
| Protein GI | 187929046 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
|---|
| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.14987 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAACT GGGTCGAGTA TCGGAAGGAA TTGCTGGGTC GCATTGGCGA GATCGGTCAG
ATCACGCCGG ATACCGTCAA GGGCTATAAG ACGCTGTCGG CTGCCACGAC GGGCAGTCTC
GACGCGAAGA CGCGTGAGCT GATCGCGCTG GCCGTGGCGG TGACCACGCG TTGCGATGGC
TGTATCACTG TGCACACGGC CGAGGCGATC AAGCATGGCG CAACGCATGA GGAGATTGCC
GACGCGCTGA GCGTGGCGAT CTCGCTCAAT GCCGGGGCAG CGTTGGTGTA CTCGGCGCGC
GTGATGGACG CCGTGCAGGC CTACGAGAAG GCCTGA
|
|---|
| Protein sequence | MLNWVEYRKE LLGRIGEIGQ ITPDTVKGYK TLSAATTGSL DAKTRELIAL AVAVTTRCDG
CITVHTAEAI KHGATHEEIA DALSVAISLN AGAALVYSAR VMDAVQAYEK A
|
|---|
| |