| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1962 |
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| Symbol | |
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| ID | 6288001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 2072020 |
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| End bp | 2073450 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642625528 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001899529 |
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| Protein GI | 187929042 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | [TIGR00909] amino acid transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.179903 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.921716 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTGT TTCGTACCAA AAACGTGGAT CACATGATCC GCACGGGCCA CAGCGACACC
GGCCTGAAGA AAGTCCTCGG GCCCCTCGAC CTGACCTTCC TGGGTGTCGG CGCCATCATC
GGAACCGGCA TCTTCGTGCT GACCGGCACC GGCGCGCTGA CGGCAGGGCC GGCGCTCACG
CTGTCCTTCA TCATCGCAGC GCTTGCATGC GGGTTTGCCG CGCTGTGCTA CGCCGAATTC
GCCTCGACCA TTCCCGTGTC GGGCTCCATC TATACGTATG CCTACGCCAC GATGGGCGAG
CTGGTCGCCT GGATCATCGG CTGGGATCTG ATGCTCGAAT ATGGCTTGGC CACATCTGCT
GTTTCGGTGG GTTGGTCCGG CTATTTCCAG TCGCTGCTGT CGGGCTTCGG CCTTCATCTG
CCGGTGGCGC TCACTGCCGC TCCGGGCGCA ATCCCGGGCG TGCAGACACT GTTCAACCTT
CCGGCGCTGG TGATCATGCT GCTGATCACG ACGCTGCTGT CGTTTGGCAT TCGCGAATCG
GCGCGTGCCA ACAACATCAT GGTGGCGATC AAGGTAACGG TGGTGGTGCT GTTCATCGTC
GTGGGTGTGC GCCATGTGCA GCCGGCCAAC TGGCAGCCGT TCATGCCGTT CGGCATGGAA
GGCGTGTTTG GCGCGGCGGC CATCGTGTTC TTCGCTTTCA TCGGCTTCGA TGCGGTGACG
TCCGCGGCCG AAGAGGTGCG CAATCCCAAG CGCGACTTGC CGATCGGCAT CATCGGTTCA
CTGGCGGTCT GCACGATTCT CTATGTACTG GTGGCCGCCA TCATGACGGG CATCGTGCCG
TTCGCGAAGT TTGCAGGCGT GGATCACCCC GTGTCGCTGG CGCTGCAAGT GGCCGGCGAA
AGCTGGGTGG CAGGCTTTGT TGATCTGGGC GCCATCATTG GCATGACCAC GGTGATCCTG
GTGATGGCGT ATGGCCAGAC TCGCATCATC TTCGCGATGT CGCGCGACGG TCTGCTGCCC
AAGCGCCTGT CGCACATTCA TCCGCGCTAC GCGACGCCGT TCCTGAACAC CTGGGTGGTC
GGCATCGTCT TCGCGGTGAT CGCCGCATTC GTGCCGCTGA ACGTGTTGGC TGAGCTGATC
AACATCGGAA CGCTGGCAGC GTTCTCGCTG ATTGCCGTTG CCGTGCTGGT GCTGCGCCGT
ACCCGTCCAG ACCTTCATCG CGGCTTCCGT TGCCCAGGCG TGCCGGTGGT GCCGCTGCTG
GCCATCGGCA TGTGCCTGTT CCTGATGAGC CACCTGCAGG CCGTCACCTG GATCGCCTTT
TTGGTGTGGG TCGCGATCGG CTTGCTGGTG TACTTCGGCT ACGCGCGCCG CCGCTCGCTG
CTGCACACGT CGGAGCATGG CGCTGCACCC GTTTCCGAAA CGGTGCACTG A
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| Protein sequence | MSLFRTKNVD HMIRTGHSDT GLKKVLGPLD LTFLGVGAII GTGIFVLTGT GALTAGPALT
LSFIIAALAC GFAALCYAEF ASTIPVSGSI YTYAYATMGE LVAWIIGWDL MLEYGLATSA
VSVGWSGYFQ SLLSGFGLHL PVALTAAPGA IPGVQTLFNL PALVIMLLIT TLLSFGIRES
ARANNIMVAI KVTVVVLFIV VGVRHVQPAN WQPFMPFGME GVFGAAAIVF FAFIGFDAVT
SAAEEVRNPK RDLPIGIIGS LAVCTILYVL VAAIMTGIVP FAKFAGVDHP VSLALQVAGE
SWVAGFVDLG AIIGMTTVIL VMAYGQTRII FAMSRDGLLP KRLSHIHPRY ATPFLNTWVV
GIVFAVIAAF VPLNVLAELI NIGTLAAFSL IAVAVLVLRR TRPDLHRGFR CPGVPVVPLL
AIGMCLFLMS HLQAVTWIAF LVWVAIGLLV YFGYARRRSL LHTSEHGAAP VSETVH
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