| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1958 |
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| Symbol | |
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| ID | 6289141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 2068014 |
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| End bp | 2069495 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642625524 |
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| Product | 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase |
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| Protein accession | YP_001899525 |
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| Protein GI | 187929038 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR02299] 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.153415 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCGCG TCAACATGGA CCCTGTCAAG CATTGGATCA ACGGTCGCCA GGTCGACAGC
GTCGAGCGTT TCGTCACGAC CAATCCGGCC ACGGGCGAGG CCATTACCGA GGTGGCATCG
GGCGGTGAGG CGGAGATCAA CGCGGCGGTT GCGGCGGCCA AGGCGGCATT TCCGGCCTGG
GCCAACACGC CAGCCAAGCA GCGCGCCAAG CTGATGCGCC GACTGGGCGA GCTGATCGAG
CAGAACGTGC CGCACCTGGC CGCGCTAGAG ACGATGGACA CCGGGCTGCC GATCGCGCAG
ACGAGCAAGC AGCTCATTCC GCGCGCTTCC GAGAACTTCC ATTTCTTCGC CGAGGTGTGC
ACGCAAGTTA ACGGTCACAC GTATCCGGTC GATGACCAGA TGCTGAACTA CACGCTGTAT
CAGCCGGTGG GCGTTTGCGC GTTGATCTCG CCGTGGAACG TGCCGTTCAT GACCGCCACG
TGGAAGGTCG CACCGTGCCT GGCGCTGGGC AATACGGCCG TGCTCAAGAT GTCGGAGTTG
TCGCCGCTGA CAGCGGACCA ACTCGGCCGT CTGGCGCTGG AAGCCGGCAT TCCGCCGGGC
GTGCTGAACG TGGTGCAAGG CTATGGCGCG ACGGCTGGCG ATGCGCTGGT GCGTCATCCG
GATGTGCGGG TGGTGTCCTT CACCGGCGGT ACGACGACCG GCAAGCGCAT CATGGAGCGT
GCGGGCCTGA AGAAATTCTC GATGGAGCTG GGCGGTAAAT CGCCCGTGCT GGTCTTCGAC
GATGCGGACC TGGATCGCGC GCTGGATGCG TCGCTGTTCA CCATCTTCTC GATCAACGGT
GAGCGATGTA CGGCCGGCTC GCGCATCTTC GTGCAAGAGA GCGTCTACGA TGATTTCGTA
CGCAAGTTTG CCGAACGTGC CAAGCGGCTT GTGGTGGGCG ACCCGGCGGA TGAGACAACC
CATGTCGGCT CGATGATCAC GCGCGCACAT TGGGAGAAGG TCACGGGCTA CATCCGTCTG
GGCGAACAGG AGGGCGCGAA GGTTCTGGCC GGCGGCGCGG AGAAGCCCGC TGGCCTGCCC
GGCCACCTGC AGAACGGCAA CTTCGTGGCG CCCACGGTGC TGGCCAACGT CGACAACCGC
ATGCGGGTGG CGCAGGAAGA AATCTTTGGC CCCGTGGCTT GCCTGATCCC GTTCAAGGAT
GAGGCCGATG GCCTGAAACT GGCCAATGAC GTGGAATACG GTCTGGCCTC GTACATCTGG
ACGCAGGACG TCGGCAAGGT GCACCGCGTG GCGCGCGGTA TCGAGGCCGG CATGGTATTC
GTCAATAGCC AGAACGTGCG CGACCTGCGT CAGCCTTTCG GCGGTGTCAA AGCGTCCGGC
ACGGGGCGTG AGGGCGGCGA GTACAGTCTG GAGGTGTTTG CCGAAATCAA GAACGTCTGC
ATCTCAATGG GCAGTCACCC TATCCCGCGC TGGGGCGTTT GA
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| Protein sequence | MSRVNMDPVK HWINGRQVDS VERFVTTNPA TGEAITEVAS GGEAEINAAV AAAKAAFPAW
ANTPAKQRAK LMRRLGELIE QNVPHLAALE TMDTGLPIAQ TSKQLIPRAS ENFHFFAEVC
TQVNGHTYPV DDQMLNYTLY QPVGVCALIS PWNVPFMTAT WKVAPCLALG NTAVLKMSEL
SPLTADQLGR LALEAGIPPG VLNVVQGYGA TAGDALVRHP DVRVVSFTGG TTTGKRIMER
AGLKKFSMEL GGKSPVLVFD DADLDRALDA SLFTIFSING ERCTAGSRIF VQESVYDDFV
RKFAERAKRL VVGDPADETT HVGSMITRAH WEKVTGYIRL GEQEGAKVLA GGAEKPAGLP
GHLQNGNFVA PTVLANVDNR MRVAQEEIFG PVACLIPFKD EADGLKLAND VEYGLASYIW
TQDVGKVHRV ARGIEAGMVF VNSQNVRDLR QPFGGVKASG TGREGGEYSL EVFAEIKNVC
ISMGSHPIPR WGV
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