Gene Rpic_1952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1952 
Symbol 
ID6286304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2063767 
End bp2064576 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content63% 
IMG OID642625518 
Productexodeoxyribonuclease III Xth 
Protein accessionYP_001899519 
Protein GI187929032 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.520652 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0243221 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGTCG CCACCTGGAA CGTCAACTCT TTGAAGGTCC GCCTACCGCA CGTGCTGCAG 
TGGCTGGCTG AGCGCGAAGC CGACGCCACG CCCATCGACC TGCTCTGCCT CCAAGAGCTC
AAGCTGCCCG ATGACCGCTA TCCGCTCGCC GAACTGGACG CAGCGGGCTA TACGTCGTTG
TTCACAGGCC AGAAGACCTA CAACGGCGTT GCCATCCTCT CGCGCAAGGC CTCTGTGCCA
GAAGGCCGCG ATGTGGTGAA GAACATCCCG GGCTTTGCCG ACGAGCAGCA GCGCATCGTA
GCCGCCACGT ATGACGTGGA CGGTGGCCCG GTCCGCGTGA TTTCTGCCTA CATCCCAAAT
GGACAAGCAC TCGATTCCGA CAAATTCGTC TACAAGCTGC GCTGGCTGGA GGCACTGCAG
GCATGGCTGA CGAGCGAGTT GGCGGCAAAC CCACGCCTGA TGCTGCTGGG CGATTTCAAC
ATCGCTCCCG AAGATCGCGA CGTGCACGAC CCGAAAAAGT GGGAAGGCCA GAACCTGGTG
TCTCCGGAGG AGCGGGCGGC GTTTCGAGCG ATGCAAGGCG CCGGGCTGGT CGATGCCTTC
CGCATGTTCG AGCAGGAAGA CAAGCTGTTC TCGTGGTGGG ATTACCGCAT GTTCGGCTTC
AAGCGCAACG CCGGCCTGCG GATCGACCAC ATCATGCTGT CGCCTGAACT CGCCAAGCTG
TGCGAGTCGT GCCATATCGA CCGCGTGCCA CGCACGTGGG AGCAGCCTTC GGACCACACA
CCCGTGGTCG CCGCCCTGCG CCGCGCATAA
 
Protein sequence
MRVATWNVNS LKVRLPHVLQ WLAEREADAT PIDLLCLQEL KLPDDRYPLA ELDAAGYTSL 
FTGQKTYNGV AILSRKASVP EGRDVVKNIP GFADEQQRIV AATYDVDGGP VRVISAYIPN
GQALDSDKFV YKLRWLEALQ AWLTSELAAN PRLMLLGDFN IAPEDRDVHD PKKWEGQNLV
SPEERAAFRA MQGAGLVDAF RMFEQEDKLF SWWDYRMFGF KRNAGLRIDH IMLSPELAKL
CESCHIDRVP RTWEQPSDHT PVVAALRRA