Gene Rpic_1950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1950 
Symbol 
ID6289622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2060538 
End bp2061407 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content67% 
IMG OID642625516 
Productbifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 
Protein accessionYP_001899517 
Protein GI187929030 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0190] 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.234735 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0583075 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCC AACTCATTGA CGGCAACGCG CTTGCCAAAC AACTCCGCGC CGAGGCCGCA 
CAGCGCGCCG CCGCCCTGAC CGCGCGCGGC CACCAGCCCG GCCTCGCCGT CATCCTCGTC
GGCGAAGACC CGGCCAGCCA GGTCTACGTG CGCAACAAGA TCAAGGCCTG CGAAGACAAC
GGCTTTCTGT CCAGCTTCGA CCGCTACCCC GCCGACCTGT CCGAAGCCGA CTTGCTCGGC
CGCATCGACG CCCTGAACCG CGACCCGCGC ATCCACGGCA TCCTGGTCCA GCTGCCGCTG
CCCAAGCACA TCGACAGCCA CAAGGTGCTC GAAGCCATCG CGCCCGAGAA AGACGTGGAC
GGTTTCCACG TGGCCAATGC CGGCGCCCTG ATGACCGGCG CCCCGCTGTT CCGCCCGTGC
ACGCCGTACG GCTGCATGAA GATGCTGGAA TCGATCAACT ACCCGGTGCG CGGCGCCAAT
GCGGTGGTGG TCGGCGCCTC GAACATCGTC GGCAAACCGA TGGCGATGCT GCTGCTGCAA
TCCGGCGCCA CCATCACGAT CTGCAACAGC AAGACGCGTG ACCTTGCCGC CCACACGCGT
GAGGCCGACA TCATCGTGGC CGCCGTCGGG CGCCGCAACA TCATTACCGC CGACATGGTC
AAGCCGGGCG CGGTCGTCAT CGACGTGGGC ATGAACCGCG ACGACGCCGG CAAGCTGTGC
GGCGACGTCG ACTTTGCCGG CGTCAAGGAA GTCGCCGGCT ACATCACGCC GGTGCCGGGC
GGTGTCGGCC CGATGACGAT CACCATGCTG CTGATCAACA CCCTGGAAGC CGCCGAGCGC
GCTGCTGAAG GAGCCGCGCT GGCGGCGTAA
 
Protein sequence
MTAQLIDGNA LAKQLRAEAA QRAAALTARG HQPGLAVILV GEDPASQVYV RNKIKACEDN 
GFLSSFDRYP ADLSEADLLG RIDALNRDPR IHGILVQLPL PKHIDSHKVL EAIAPEKDVD
GFHVANAGAL MTGAPLFRPC TPYGCMKMLE SINYPVRGAN AVVVGASNIV GKPMAMLLLQ
SGATITICNS KTRDLAAHTR EADIIVAAVG RRNIITADMV KPGAVVIDVG MNRDDAGKLC
GDVDFAGVKE VAGYITPVPG GVGPMTITML LINTLEAAER AAEGAALAA