| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1941 |
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| Symbol | |
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| ID | 6288406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 2046895 |
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| End bp | 2047899 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642625507 |
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| Product | histone deacetylase superfamily |
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| Protein accession | YP_001899508 |
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| Protein GI | 187929021 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00172119 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00484876 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGCCCGA GTGCTATTTT TGTTGCGTTG CGATTTGTTA TTCACATGCG GGCGTTCTAT
ACCGACCACT TTGTCTTGCC GCTGCCGCCG GGCCATCGGT TTCCAATGCG CAAGTACAGC
GACCTGCGCG CACGGGTTCT GGCCGACGTG CCGGGGCTAT CCATGCATGA GGCGCCGCGG
GCCGATGACG ACGCGTTGCT GCTGGCGCAC ACGTCTGAAT ATGTTGAGGC GGTAAGCGCC
GGGCGGCTTG ACCCCGCGCG TCAGCGGGAG ATCGGGTTTC CCTGGTCGCC GGAAATGGTC
GAGCGCAGCC GCCGTTCGGC GGGGGCCACG ATGGCCGCGT GCGAGGCTGC GCTGGCGGAT
GGCATTGCCG TCAATTTGGC GGGCGGCACG CACCATGCCT ATGCGGACAA GGGCGGCGGT
TTCTGTGTAT TCAACGACGC TGCCATCGCC TCGCGCTGGA TTCAGCGCCG GCCGGGCAGG
ACGCCGGCGA ATTTTCCGGT CGCCATCGTC GATCTCGACG TACATCAGGG CAACGGCACG
GCGTCGATCC TGCGCGATGA CGCGGCTGTT TTCACCTTGT CCTTGCATGG AGAGAAGAAC
TACCCGTTCC GCAAAGAAGC CTCGGATCTG GACATCGGCC TGCACGATGG CTGCGGCGAC
GAGGACTATC TGCAGGCGCT GACTGGCGCT CTCGATATCC TGGCCGGGCG CTTCAAGCCA
CAGTTGATCA TCTATCTGGC CGGCGCGGAC CCGCACGAGG GCGATCGCCT CGGCCGGCTC
AAACTGACTC TCCAGGGTCT GGCCCGGCGC GACCAGGAAG TCTTCGATTT CGCATATCAA
CGGCGCATAC CGATTGCCGT TACCATGGCG GGCGGCTACG GCAACAATAT CGACGATACC
GTGGCCGTCC ACGCGCAGAC CATCGCGCTG GCTGCGCGGC ACGCACAGCG CTGGGCGGCC
CGCGACGAGG CCGCCGCCTC GCACTCTCTT CCGCTTTCCG CATGA
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| Protein sequence | MRPSAIFVAL RFVIHMRAFY TDHFVLPLPP GHRFPMRKYS DLRARVLADV PGLSMHEAPR
ADDDALLLAH TSEYVEAVSA GRLDPARQRE IGFPWSPEMV ERSRRSAGAT MAACEAALAD
GIAVNLAGGT HHAYADKGGG FCVFNDAAIA SRWIQRRPGR TPANFPVAIV DLDVHQGNGT
ASILRDDAAV FTLSLHGEKN YPFRKEASDL DIGLHDGCGD EDYLQALTGA LDILAGRFKP
QLIIYLAGAD PHEGDRLGRL KLTLQGLARR DQEVFDFAYQ RRIPIAVTMA GGYGNNIDDT
VAVHAQTIAL AARHAQRWAA RDEAAASHSL PLSA
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