Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1936 |
Symbol | |
ID | 6286184 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 2042264 |
End bp | 2043061 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642625502 |
Product | transcriptional regulator, IclR family |
Protein accession | YP_001899503 |
Protein GI | 187929016 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.00885833 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAGAAG CAGACAAGGA CCCCGGCAAG ACGTCTATCC AGGTCATCGA ACGCATGATG ATGCTGCTCG ACGCGCTTGC CGATCACGCC GATCCGGTCA GCCTGAAGGC GCTGTCGGCC AGCACCGGCC TGCACCCGTC CACCGCGCAT CGCATCCTGA ACGACATGGT GGCTTGCCGC TTCGTCGATC GCTCCGACCC GGGCAGCTAC CGTCTCGGCA TGCGTTTGCT CGAACTCGGC AACCTGGTCA AGGCGCGCCT CTCGGTACGA GAAGCGGCGC TCGCGCCGAT GCGCGCCCTG CACCGCCTGA CGGGCCAGAC CGTCAACCTC TCGGTGCGTC AGGGCGACGA GATCGTCTAC ATCGAGCGCG CCTATTCCGA GCGCTCTGGC ATGCAAGTGG TGCGCGCCAT CGGTGGCCGC GCACCGCTGC ATCTGACTTC GGTTGGCAAG TTGTTCCTGG CTGCTGACGA ACTCGGCCGT GTGCGCGCCT ATGCGACACG CACGGGCTTG TCTGGCCACA CCCGCACCTC CATCACGGAT TTGCCCAAGC TTGAACGCGA ACTCAACTGG GTGCGCACCA ACGGCTACGC GCGTGACAAC GAAGAACTGG AACTCGGCGT GCGCTGCATC GCTGCCGGCA TCTATGATGA TTCGCGCCGG CTGGTAGCAG GTCTGTCGCT GTCTGCACCG GCAGACCGGT TGCAGGACAG CTGGCTCGAC AATCTCAAGG ACACCGCGCT ACAGATCTCC AAAGGCATGG GCTACACGTA TGAAGAGGAC GCCGTGCGCG CGGAGTGA
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Protein sequence | MAEADKDPGK TSIQVIERMM MLLDALADHA DPVSLKALSA STGLHPSTAH RILNDMVACR FVDRSDPGSY RLGMRLLELG NLVKARLSVR EAALAPMRAL HRLTGQTVNL SVRQGDEIVY IERAYSERSG MQVVRAIGGR APLHLTSVGK LFLAADELGR VRAYATRTGL SGHTRTSITD LPKLERELNW VRTNGYARDN EELELGVRCI AAGIYDDSRR LVAGLSLSAP ADRLQDSWLD NLKDTALQIS KGMGYTYEED AVRAE
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