Gene Rpic_1936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1936 
Symbol 
ID6286184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2042264 
End bp2043061 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content64% 
IMG OID642625502 
Producttranscriptional regulator, IclR family 
Protein accessionYP_001899503 
Protein GI187929016 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.00885833 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAGAAG CAGACAAGGA CCCCGGCAAG ACGTCTATCC AGGTCATCGA ACGCATGATG 
ATGCTGCTCG ACGCGCTTGC CGATCACGCC GATCCGGTCA GCCTGAAGGC GCTGTCGGCC
AGCACCGGCC TGCACCCGTC CACCGCGCAT CGCATCCTGA ACGACATGGT GGCTTGCCGC
TTCGTCGATC GCTCCGACCC GGGCAGCTAC CGTCTCGGCA TGCGTTTGCT CGAACTCGGC
AACCTGGTCA AGGCGCGCCT CTCGGTACGA GAAGCGGCGC TCGCGCCGAT GCGCGCCCTG
CACCGCCTGA CGGGCCAGAC CGTCAACCTC TCGGTGCGTC AGGGCGACGA GATCGTCTAC
ATCGAGCGCG CCTATTCCGA GCGCTCTGGC ATGCAAGTGG TGCGCGCCAT CGGTGGCCGC
GCACCGCTGC ATCTGACTTC GGTTGGCAAG TTGTTCCTGG CTGCTGACGA ACTCGGCCGT
GTGCGCGCCT ATGCGACACG CACGGGCTTG TCTGGCCACA CCCGCACCTC CATCACGGAT
TTGCCCAAGC TTGAACGCGA ACTCAACTGG GTGCGCACCA ACGGCTACGC GCGTGACAAC
GAAGAACTGG AACTCGGCGT GCGCTGCATC GCTGCCGGCA TCTATGATGA TTCGCGCCGG
CTGGTAGCAG GTCTGTCGCT GTCTGCACCG GCAGACCGGT TGCAGGACAG CTGGCTCGAC
AATCTCAAGG ACACCGCGCT ACAGATCTCC AAAGGCATGG GCTACACGTA TGAAGAGGAC
GCCGTGCGCG CGGAGTGA
 
Protein sequence
MAEADKDPGK TSIQVIERMM MLLDALADHA DPVSLKALSA STGLHPSTAH RILNDMVACR 
FVDRSDPGSY RLGMRLLELG NLVKARLSVR EAALAPMRAL HRLTGQTVNL SVRQGDEIVY
IERAYSERSG MQVVRAIGGR APLHLTSVGK LFLAADELGR VRAYATRTGL SGHTRTSITD
LPKLERELNW VRTNGYARDN EELELGVRCI AAGIYDDSRR LVAGLSLSAP ADRLQDSWLD
NLKDTALQIS KGMGYTYEED AVRAE