Gene Rpic_1930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1930 
Symbolaat 
ID6286559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2037508 
End bp2038254 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content66% 
IMG OID642625496 
Productleucyl/phenylalanyl-tRNA--protein transferase 
Protein accessionYP_001899497 
Protein GI187929010 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2360] Leu/Phe-tRNA-protein transferase 
TIGRFAM ID[TIGR00667] leucyl/phenylalanyl-tRNA--protein transferase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.498495 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0297291 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGCCT GGCTGGATCC GCACGATCCC TTCCCGCCGG TCGATCGCGC GCTCGGGCCG 
GAGTCCGAAG CGCCCGGCCT GCTGGCCGCC AGCGCTGAGC TATCGCCGCA ACGGCTGCTG
ATTGCGTATC GACAAGGCAT TTTTCCGTGG TATGCCCAGG GCCAGCCGGT GTTGTGGTGG
AGCACCGATC CACGCATGGT GCTCCGCCCC GAAGACTTTC GCGTATCAAC CACGTTTCGC
AAGACGCTGC GCCGCGTGCT TGACGACCCG GCCTGGGAAA TCCGCATCGA CCACGCCTTC
CGCGAAACGA TGGTCGCGTG CGCCACCACA GCGCGCCCTG GACAGCACGG CACGTGGATC
ACCGAAGACG TCATCCAGGC GTACACAGCC CTGCACCGCC GCGGCTACGC GCACAGCGTG
GAGACGTGGC ACGCCGGGCA ACGTGTGGGT GGCCTGTACG GCGTGGCGCT TGGCCGCATG
TTCTACGGTG AATCGATGTT TGCGCATCGC ACCGATGCCT CGAAAATCGC GCTGGCAGCG
CTCTGCGCCT TCCTCGGCGG TCAGGGCGTC GCGATGATAG ACTGCCAGCA GGAAACCGAG
CATCTGGCGT CGCTGGGCGG TGCCCCGGTG CCGCGCGCGG CGTTTCTCGC ACATGTGCGC
GAAGCGGCCA GCGCGCCGGC CATTGTGCCG TGGCACTTCG ACAAATCGGT GCTCCGCCGG
TGGACCGTAC GCAATGAGCA AGCTTAA
 
Protein sequence
MIAWLDPHDP FPPVDRALGP ESEAPGLLAA SAELSPQRLL IAYRQGIFPW YAQGQPVLWW 
STDPRMVLRP EDFRVSTTFR KTLRRVLDDP AWEIRIDHAF RETMVACATT ARPGQHGTWI
TEDVIQAYTA LHRRGYAHSV ETWHAGQRVG GLYGVALGRM FYGESMFAHR TDASKIALAA
LCAFLGGQGV AMIDCQQETE HLASLGGAPV PRAAFLAHVR EAASAPAIVP WHFDKSVLRR
WTVRNEQA