Gene Rpic_1929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1929 
Symbol 
ID6286558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand+ 
Start bp2036896 
End bp2037483 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content60% 
IMG OID642625495 
ProductNUDIX hydrolase 
Protein accessionYP_001899496 
Protein GI187929009 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.347104 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0451011 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTCT GTTCCAACTG CGGCCAGTCA GTCGTCTCGC GCATTCCCGC CGGTGACAAC 
CGACTGCGGG ACGTTTGCGA CCATTGCAAT ACGATTCACT ATGTGAATCC GCGCAACGTG 
GTTGGCACCG TGCCGGTTTG GAATGATCAG ATCCTCCTGT GCAAGCGCGC CATTGAACCG 
CGCTACGGCT TCTGGACGCT GCCCGCAGGC TTCATGGAAA TCGGGGAAAC CACCGCGCAG 
GCCGCCAACC GCGAAACGCA GGAAGAAGCC GGCGCCAACG TCGAAATCGG CGAGCTGTAT 
TCGGTGCTCA ACGTGCCGCA CGTGCACCAG GTGCACCTGT TCTATCTGGC CAAGCTGAAC 
GATCTGGATT TCGCCCCGGG CGAAGAAAGC CTGGAAGTCG CACTCTTCCA TGAAGCCGAC 
ATCCCTTGGG ATGACTTGGC CTTCCCGACT GTCATCCACA CGCTGCGTTG CTTCTTTGCA 
GACCGCGCAG CCGGCAGGCT AGCTGACGGC AGCTTCCGCC TCCACACGCT CGACATCTAC 
AAGCCGATGC GCTCGGCTGC AATCGACACG CCGGCCACGA CGCCGTAA
 
Protein sequence
MKFCSNCGQS VVSRIPAGDN RLRDVCDHCN TIHYVNPRNV VGTVPVWNDQ ILLCKRAIEP 
RYGFWTLPAG FMEIGETTAQ AANRETQEEA GANVEIGELY SVLNVPHVHQ VHLFYLAKLN 
DLDFAPGEES LEVALFHEAD IPWDDLAFPT VIHTLRCFFA DRAAGRLADG SFRLHTLDIY 
KPMRSAAIDT PATTP