Gene Rpic_1926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1926 
Symbol 
ID6289395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2032708 
End bp2034609 
Gene Length1902 bp 
Protein Length633 aa 
Translation table11 
GC content62% 
IMG OID642625490 
ProductK potassium transporter 
Protein accessionYP_001899493 
Protein GI187929006 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3158] K+ transporter 
TIGRFAM ID[TIGR00794] potassium uptake protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0406918 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0407314 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAAG CTCTCACAGC AACCGGGTCG CCCCAGACCA ACGTGAACCT GCGCGCCATG 
GTGATCGGCG CCGTGGGTGT GGTGTTCGGA GACATCGGCA CCAGCCCGCT GTATTCGCTC
AAGGAATGCT TCAGCCCTGA TCACGGCATT CCCTTCTCCA GCGGTGCGGT GCTCGGCATC
ATCTCCATGC TGTTTTGGGC GATGGTGATC GTGGTGTCGC TCAAGTATGT GCTGTTCGTC
ATGCGCGCCG ACAACAACGG CGAGGGCGGC ATTCTCGCGC TGATGGCGCT GTCGCTGCGT
ACGGCCAATA CCGATTCCCG GCGCATGTCG CTGCTGATGA TGCTGGGCGT CTTCGGCGCG
TGCATGTTCT ACGGCGACGC CGTGATCACG CCGGCCATCT CCGTCCTGTC GGCCATGGAG
GGCCTGGAGA TCGCCGCGCC CGCGCTGTCG CCGTTTGTGC TGCCGATCAC GATCGTGATT
CTGGCAGTCC TGTTCCTCAT CCAACGGAGC GGCACGTCGG TGGTCGGCAA GCTGTTCGGT
CCGGTGATGC TGCTGTGGTT TGCCGCGCTA GCCGCGCTGG GCATGATGAA TCTGGTGAAG
GCGCCGCAGA TTCTGGTGGC CGTCAACCCG ATGTATGCGA TTTCGTTCCT GCACGACCAT
GCGCTGCAGG CGTTCATCGT GCTGGGTTCG GTGTTTCTGG TGCTGACCGG CGCTGAAGCG
CTGTACGCTG ACATGGGCCA CTTCGGCGCC CGGCCCATCC GCTGGGCGTG GTTCTTCATC
GTAGCGCCGA GCTTGTTGGT GAACTACTTC GGCCAAGGCG CCATGCTGCT GACCGACCCA
AGCACCATCG AAAACCCGTT TTACCGTTCC GTGCCGGAAG CGCTGCAACT CCCGATGGTG
ATGCTTGCGG CGGCGGCTAC CGTCATTGCC TCGCAGGCCG TGATTTCGGG AGCGTTCTCG
CTGACGAGTC AGGCGATTCA GCTTGGCTTT GTGCCGCGCA TGCGCATTCG CTACACGTCG
GAAGCCGAGA TCGGCCAAAT CTACGTGCCG ATGGTCAACT GGATGCTGCT GATCCTGGTG
GTGGGCGTGG TGCTGGCGTT CAAGAAGTCC GACAACCTGG CTGCCGCCTA CGGCATCGCC
GTGACGACCA CGATGGTCAT TACCACGGTG CTGGCTGCGG TGGTGATGCG CTCGGTCTGG
CGTTGGCATC CGGCGCTGGT GACGCTCGTG AGTGTCTGTT TCCTGGTGGT GGACTTGGCG
TTCTTCGCCG CGAACCTCTT GAAGATCCGC GATGGCGGTT GGTTCCCGTT GACGCTGGGC
GCCGGTGTGT TCTTCCTCCT GATGACCTGG TACAAGGGCA AGAAGCTTCT GCGTGCGCGC
AGCCTGGAGG ATGGCATCCC ACTCGAGCCG TTCCTGGCTG GGTTGCTGGC CCATCCGCCG
CATCGGGTCG AGGGCACGGC CGTTTTCCTC ACAGGCAATA CCGAATTCGT GCCGGTGTCG
TTGCTGCATA ACCTCAAGCA CAACCGCGTG CTCCACGAGC GCGTGATCTT CATCAGCTTC
GTCACACGCG ATATTCCCTA CGTGGACGAC AAGCACCGCG TGTCCGTGCG CGATCTCGGC
AGCGGCATCT ACATCGTCAA GGCGGATTAT GGCTTCAAGG AAACGCCGGA TGTGTACCGC
GTGCTCGAAC TGGGGCAGCC GCAGATCGGC ACGCGCTGTG AATTGATGGA TACATCGTTC
TTCATCGCGC GTGAGTCGGT GGTGCCGTCC AAGCTGCCGG GTATGTCGAT GTGGCGTGAG
CGGCTGTTTG CATGGATGCA TCAAAACGGC GCCAAGCCGT CGGACTTCTT CCACATCCCC
GCCAACCGCG TGGTGGAACT GGGTACCAAG GTCGAAATCT GA
 
Protein sequence
MSQALTATGS PQTNVNLRAM VIGAVGVVFG DIGTSPLYSL KECFSPDHGI PFSSGAVLGI 
ISMLFWAMVI VVSLKYVLFV MRADNNGEGG ILALMALSLR TANTDSRRMS LLMMLGVFGA
CMFYGDAVIT PAISVLSAME GLEIAAPALS PFVLPITIVI LAVLFLIQRS GTSVVGKLFG
PVMLLWFAAL AALGMMNLVK APQILVAVNP MYAISFLHDH ALQAFIVLGS VFLVLTGAEA
LYADMGHFGA RPIRWAWFFI VAPSLLVNYF GQGAMLLTDP STIENPFYRS VPEALQLPMV
MLAAAATVIA SQAVISGAFS LTSQAIQLGF VPRMRIRYTS EAEIGQIYVP MVNWMLLILV
VGVVLAFKKS DNLAAAYGIA VTTTMVITTV LAAVVMRSVW RWHPALVTLV SVCFLVVDLA
FFAANLLKIR DGGWFPLTLG AGVFFLLMTW YKGKKLLRAR SLEDGIPLEP FLAGLLAHPP
HRVEGTAVFL TGNTEFVPVS LLHNLKHNRV LHERVIFISF VTRDIPYVDD KHRVSVRDLG
SGIYIVKADY GFKETPDVYR VLELGQPQIG TRCELMDTSF FIARESVVPS KLPGMSMWRE
RLFAWMHQNG AKPSDFFHIP ANRVVELGTK VEI