| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1924 |
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| Symbol | |
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| ID | 6289393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 2029668 |
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| End bp | 2032001 |
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| Gene Length | 2334 bp |
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| Protein Length | 777 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642625488 |
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| Product | RNA binding S1 domain protein |
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| Protein accession | YP_001899491 |
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| Protein GI | 187929004 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0525601 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGATT CCGTGTTGCA GAAGATCGTC TCCCGCATCG CCATTGAACT GGCGGTCCGG
CCCCAGCAGG TTGCCGCCGC CGTGCAACTG CTGGACGAAG GCGCCACAGT GCCCTTCATC
GCACGTTACC GCAAGGAAGT GACGGACAAC CTGGACGACA CGCAACTGCG CAACCTGGAA
GAGCGCCTGC TGTACCTGCG CGAACTGGAA GACCGCCGCG CGGCCATCCT GGCTTCCATT
GAAGAGCAAG GCAAGCTGAC CGATGCCCTG CGCACCGCCA TCGAGGCGGC CGAGACCAAG
CAGGTGCTGG AAGATCTCTA CCTGCCCTAC AAGCCCAAGC GCCGCACACG CGCTCAGATC
GCCCGCGAAT GCGGCCTGGA GCCGCTGGCC CAGGCGCTGC TGGCCGACCC CACGCTCGAT
CCTCAAACCG AAGCCGCCAA GTTCGTCAAC GGCAATCCGA CCGCCGATGG TGGCGTGCCG
GACGTGAAGG CCGCACTGGA CGGCGCACGC GACATCCTCT CCGAGCAATT TGGCGAGACA
GCCGAGCTGC TTGGCAAGGT GCGCGACCAT CTTTGGAATC AAGGCCAGGT TTCGTCGACC
GTGGTGGAAG GCAAGGAAAC CGCCGAAGAA GAAAAATTCC GCGATTACTA CGCGTATAGC
GAGCCGATCC GCAACGTGCC GTCGCACCGC GCGCTGGCCC TGTTCCGCGG CCGCAATGCA
GGCGTGCTGT TCGTCAAACT CGGACTCGGC GAAGAACAGG ACGCGCTGAA CCCGCACCCG
TGCGAAATCA TGATCGCGCG CCATGTCGGC ATCGAAAACA GGGGCCGCGC AGCTGACAAG
TGGCTGTCGG ACGTGTGCCG CTGGTGCTGG CGCGTGAAGG TTCAGCCGCA TATCGAAACC
GAACTGCTCA CGCAACTCCG GGAATCGGCC GAAGCCGAGG CCATCAAGAT CTTCGGCCGC
AATCTGCACG ATCTGCTGCT GGCCGCGCCG GCCGGCCCGA AAGCGGTGAT GGGCGTCGAC
CCGGGCATCC GCACGGGCTG CAAGATCGCG GTGGTTGACC ACACTGGCAA GCTGCTCGAA
ACCGCTACGA TCTATCCGCA CGAGCCGCGC CGCGACTGGA ACGGTTCGCT CGCGACGATG
GCCCGCCTGG CCAAGCAGCA CGGCGTGGCC CTGGTTTCCA TCGGCAACGG CACAGCAAGC
CGCGAGACCG ACAAGTTGGT GCAGGACCTG ATGCGTAACG CACCGGAGCT GAAGCTGACC
AAGATCGTGG TGAGCGAGGC CGGCGCGTCT GTGTATTCGG CGTCGGAGCT GGCGGCCAAG
GAGTTCCCCG AACTGGACGT GTCGCTACGT GGCGCGGTGT CGATCGCGCG CCGCCTGCAA
GACCCGCTGG CCGAACTCGT GAAGATCGAC CCGAAGTCGA TCGGCGTCGG CCAGTATCAG
CACGACGTGA ACCAGCGCGA GCTGGCACGC GCGCTGGACG CCATCGTCGA GGATTGCGTG
AACGCGGTCG GCGTGGATGT GAACACAGCC TCTGCCCCGC TGCTGGCGCG TGTATCGGGC
CTGAACTCCA TCCTCGCCAA GAACATCGTC GAGTATCGCG ATGCCAACGG CGCGTTCGCC
AACCGCGACG CGCTCAAGAA AGTCCCGCGC CTGGGCGACA AGACGTTCGA GCAGGCCGCA
GGCTTCCTGC GCATCAACGA CGGCGACAAT CCGCTGGATC GTTCCTCGGT GCACCCGGAA
GCGTATCCGG TGGTCAAGCG CATCCTCGAC AGCATCAAGA AGGGCATCGG CGACGTGCTC
GGCAACCGCG AGGCACTGCG TGGCCTGACC GCCCGTGACT TCACCGACGA GAAATTCGGC
CTGCCGACCG TGGTCGACAT CCTGTCTGAA CTGGAAAAAC CCGGCCGCGA CCCGCGCCCC
GAGTTCAAGA CGGCGACGTT CCAGGACGGC GTGGAAGACA TCAAGGACCT GCAGCCCGGC
ATGGTGCTCG AAGGCGTGGT GACGAACGTG GCGGCGTTTG GCGCCTTCAT CGACATCGGC
GTGCATCAGG ACGGCCTGGT ACACGTGTCG GCGCTGTCGA CCAAGTTCGT GCGCGACCCG
CACGAGGTGG TCAAGCCTGG CCAGATCGTC AAGGTCAAGG TGATGGAGGT GGACGTGAAG
CGCAACCGCA TCGGCCTGAC GATGCGCCTC TCGGATGAGC CCGGTCAGAC GGCCGCGCGC
ACGGGCGGCA GCGATCGCCC GAGCAGCGGC GGCGGTCGCC ACGGCGGTCA GCAACGTCGT
GCGCCGGAAC CGTCCGGCGC CATGGCAGAA GCGTTCGCCA AGCTCAAGCG CTAA
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| Protein sequence | MTDSVLQKIV SRIAIELAVR PQQVAAAVQL LDEGATVPFI ARYRKEVTDN LDDTQLRNLE
ERLLYLRELE DRRAAILASI EEQGKLTDAL RTAIEAAETK QVLEDLYLPY KPKRRTRAQI
ARECGLEPLA QALLADPTLD PQTEAAKFVN GNPTADGGVP DVKAALDGAR DILSEQFGET
AELLGKVRDH LWNQGQVSST VVEGKETAEE EKFRDYYAYS EPIRNVPSHR ALALFRGRNA
GVLFVKLGLG EEQDALNPHP CEIMIARHVG IENRGRAADK WLSDVCRWCW RVKVQPHIET
ELLTQLRESA EAEAIKIFGR NLHDLLLAAP AGPKAVMGVD PGIRTGCKIA VVDHTGKLLE
TATIYPHEPR RDWNGSLATM ARLAKQHGVA LVSIGNGTAS RETDKLVQDL MRNAPELKLT
KIVVSEAGAS VYSASELAAK EFPELDVSLR GAVSIARRLQ DPLAELVKID PKSIGVGQYQ
HDVNQRELAR ALDAIVEDCV NAVGVDVNTA SAPLLARVSG LNSILAKNIV EYRDANGAFA
NRDALKKVPR LGDKTFEQAA GFLRINDGDN PLDRSSVHPE AYPVVKRILD SIKKGIGDVL
GNREALRGLT ARDFTDEKFG LPTVVDILSE LEKPGRDPRP EFKTATFQDG VEDIKDLQPG
MVLEGVVTNV AAFGAFIDIG VHQDGLVHVS ALSTKFVRDP HEVVKPGQIV KVKVMEVDVK
RNRIGLTMRL SDEPGQTAAR TGGSDRPSSG GGRHGGQQRR APEPSGAMAE AFAKLKR
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