Gene Rpic_1918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1918 
Symbol 
ID6289865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2023484 
End bp2024293 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content66% 
IMG OID642625482 
Productprotein of unknown function DUF152 
Protein accessionYP_001899485 
Protein GI187928998 
COG category[S] Function unknown 
COG ID[COG1496] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00726] uncharacterized protein, YfiH family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.396331 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0287676 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATGT CAACTGACTG GATCGTCCCC GACTGGCCTG CGCATCCTCG CGTCAAGGCG 
CTGGCCACGA CGCGCCTGGG TGGCGTCAGT ACAGGACCTT ACGGTTTGGC CGGCGGTTTG
CCGGGTGGCC TGAACCTCGG CCAGCACGTC GGTGACGCGC CCGAAGCCGT TGATCAGAAT
CGCCGCATCT TGCGTGCAGC GCTACCCGCC GATCCAACAT GGATGGAACA GGTGCACGGC
ACCGATGTGG CTGATCTTGA TCAACTCGTT GGTACGTCAG CGCCTGTGGT CGCCGATGCG
GCGGTGGCGT CCTGGCGGGA TCGCGTCTGC GTAGTCATGA CGGCCGATTG CCTGCCTGTC
TTGCTGAGCG ACGCCCGCGG CGTCACTGTG GGCGCCGCGC ATGCGGGCTG GCGTGGTCTC
TGTGGCGGCG TGATCGAGCG CACGCTCGAC GCCATGATGC AGCGGCTGCG TGCCAGCGGG
CAGGAGGCCG ATCCCACGTG GCTGGCATGG CTGGGGCCCG CCATCGGACC ATCATGCTTT
GAAGTGGGTG AGGAAGTGCG TCAAGCCTTT ATCGACGCCG TCAGGCCCGG CGAACTGCCT
GCCACGGAAG CGGCGTTCCG GGAGGGCGTA TCGGCTGGCA AGGTCTTTGC CGACCTGTAT
GCGCTGGCCC GGCTGCGGCT GGCGCGGGTT GGTTGTACCG ACGTGTACGG CGGCGGCCTG
TGCACGATGA TGGACGTCGA GCGCTTCTAT TCATACCGAC GGGAGCGCAT CACAGGCCGT
ATGGCCACGC TGATCTGGCG CGCCGAGTAA
 
Protein sequence
MPMSTDWIVP DWPAHPRVKA LATTRLGGVS TGPYGLAGGL PGGLNLGQHV GDAPEAVDQN 
RRILRAALPA DPTWMEQVHG TDVADLDQLV GTSAPVVADA AVASWRDRVC VVMTADCLPV
LLSDARGVTV GAAHAGWRGL CGGVIERTLD AMMQRLRASG QEADPTWLAW LGPAIGPSCF
EVGEEVRQAF IDAVRPGELP ATEAAFREGV SAGKVFADLY ALARLRLARV GCTDVYGGGL
CTMMDVERFY SYRRERITGR MATLIWRAE