| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1911 |
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| Symbol | rimO |
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| ID | 6289698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 2015478 |
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| End bp | 2016839 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642625475 |
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| Product | ribosomal protein S12 methylthiotransferase |
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| Protein accession | YP_001899478 |
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| Protein GI | 187928991 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0408943 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGACG TCAGTACCCA GAGCCCCAAG GTGGGGTTCG TCAGTCTCGG TTGTCCCAAG
GCCTTGGTCG ATTCCGAGCA GATCATCACC CAACTGCGCG CGGAGGGGTA TGAGATTTCC
GGCACGTACG GCGGGGCGGA CCTGGTGGTC GTCAACACCT GCGGCTTCAT CGACGAGGCT
GTGCAGGAAA GCCTGGATGC GATTGGCGAG GCGCTGGCCG AGAACGGCAA GGTGATCGTG
ACCGGCTGCC TGGGTGCCAA GAAGGACGCT TCGGGCCAGG ACATCATCAC CAGCGTGCAC
CCGAAGGTGC TGGCTGTGAC GGGCCCCCAT GCGCTGGGCG AGGTGATGGA AGCGGTGCAC
ACGCACCTGC CCAAGCCGCA CGACCCGTTC ATTGACCTGG TGCCGCCGCA GGGCATCAAG
CTCACGCCGA AGCACTACGC GTATCTGAAG ATTTCCGAGG GCTGCAACCA CCGGTGCAGC
TTCTGCATCA TCCCGTCGAT GCGCGGCGAT CTCGTTTCGC GCCCGGTGGC CGAAGTGATG
CTGGAGGCGG AAAACCTGCT GAAGGCCGGC GTGAAGGAAC TGCTCGTTAT CTCGCAGGAC
ACCAGCGCTT ATGGCGTCGA TGTCAAATTC CGCATGGGCT TCTGGAACGG CCGCCCGCTG
AAGACGCGCA TGACCGAGCT GGTGGGCGCG CTCGGCGAAT TGGCGTCGCA GTACGGCGCC
TGGGTGCGCC TGCACTACGT CTACCCCTAT CCGAGCGTGG ATGAGGTGAT GCCCCTGATG
GCTGAGGGCA AGGTCCTTCC CTATCTGGAC GTGCCGCTGC AGCACGCCCA CCCGGACGTG
CTCAAGCGCA TGAAGCGCCC CGCCAACGCC GAGAAGACGC TGGACCGCAT CCGCGCCTGG
CGCGAGGTGT GCCCGGAGCT GACCATCCGC AGCACGTTCA TCGCGGGTTT CCCGGGTGAA
ACGGAGGAAG AGTTCCAAAC GCTGCTCGAC TTCATTGCCG AGGCCGAACT GGACCGCGTG
GGCTGCTTCG CGTATTCGCC GGTCGAGGGC GCGACCGCCA ACGACCTGCC GGGCGCATTG
CCCGATGAGG TGCGCGAGGA GCGCCGCGCG CGCTTCATGG AAGTCGCCGA GCGCGTGTCT
GCGCGCGGTC TGCAGCGCAA GGTTGGCAAG TCGCTGCGCG TGCTTGTGGA CGAAGTGAAT
CAGGACGGCG GCATCGGCCG TTCATCGGCG GATGCCCCGG AGATTGACGG CCTCGTCTAT
ATCGCGCCGC CGTCGAAGCC GTACAAGCGC TATAAGGCGG GCGATTTCGT GTCGGTCAAG
ATTACCGGCG CGGATGGCCA CGACCTGTGG GGCGAGGTCT GA
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| Protein sequence | MSDVSTQSPK VGFVSLGCPK ALVDSEQIIT QLRAEGYEIS GTYGGADLVV VNTCGFIDEA
VQESLDAIGE ALAENGKVIV TGCLGAKKDA SGQDIITSVH PKVLAVTGPH ALGEVMEAVH
THLPKPHDPF IDLVPPQGIK LTPKHYAYLK ISEGCNHRCS FCIIPSMRGD LVSRPVAEVM
LEAENLLKAG VKELLVISQD TSAYGVDVKF RMGFWNGRPL KTRMTELVGA LGELASQYGA
WVRLHYVYPY PSVDEVMPLM AEGKVLPYLD VPLQHAHPDV LKRMKRPANA EKTLDRIRAW
REVCPELTIR STFIAGFPGE TEEEFQTLLD FIAEAELDRV GCFAYSPVEG ATANDLPGAL
PDEVREERRA RFMEVAERVS ARGLQRKVGK SLRVLVDEVN QDGGIGRSSA DAPEIDGLVY
IAPPSKPYKR YKAGDFVSVK ITGADGHDLW GEV
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