Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1910 |
Symbol | |
ID | 6289697 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 2014206 |
End bp | 2015390 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642625474 |
Product | beta-ketothiolase |
Protein accession | YP_001899477 |
Protein GI | 187928990 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0183] Acetyl-CoA acetyltransferase |
TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.614831 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0602088 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACGTG AAGTGGTGGT GGTCAGCGGC GTTCGTACCG CAATCGGGAC GTTTGGCGGC AGCTTGAAGG ATGTGGCGCC GTGCGAACTC GGCGCGCTCG TCGTGCGCGA GGCGCTGGCC CGCGCCGGGG TGAAGGGCGA GGACGTCGGC CACGTGGTGT TTGGCCACGT GATCAACACC GAGCCGCGCG ACATGTATCT CTCGCGTGTG GCCGCAGTCA ACGGCGGGGT GTCGGCCGAA ACGCCCGCAT TCAACGTCAA CCGCCTGTGC GGCTCTGGCC TCCAGGCCGT GGTGAGCGCA GCGCAAACCG TGCTGCTGGG CGATGCCGAT ATCGCCATTG CCGGTGGCGC GGAAAGCATG AGCCGCGCGC CGTACCTGGC GCCTGCCGCC CGTTGGGGTT CGCGCATGGG CGACGCCAAG ATGGTCGACA TGATGCTCGG CGCGCTGCAC GACCCGTTCC ACACGATCCA CATGGGTGTG ACGGCGGAAA ACGTCGCCCG CGAATTCGGC ATCAGCCGCG AGCAGCAAGA TCAGACCGCG CTGGAGTCCC ACCAGCGTGC ATCGCGTGCC ATCCAGGCCG GCTACTTCAA GGACCAGATC GTTCCGGTGA CGATCAAGTC GCGCAAGGGC GATATCCAGT TCGATACCGA TGAGCACGTC CGCCACGACG CGACCATCGA CGACATGACC AAGCTCAAGC CGGTCTTCAC GAAAGAAAAC GGTACGGTGA CGGCGGGCAA CGCTTCGGGC CTCAACGATG CAGGCGCGGC GCTGGTGCTG ATGGAGCGTT CGGTGGCCGA AAAGCGCGGC CTCAAGCCAC TGGCCCGGCT GGTGTCGTAC GGCCATGCGG GCGTGGATCC GAAGATCATG GGTATCGGCC CGGTGCCGGC CACGCGCAAG GCGCTGGAGC GGGCAGGCCT GTCGGTCAAG GATCTGGATG TGATCGAAGC CAACGAGGCA TTTGCCGCCC AGGCTTGTGC GGTGACGAAG GAACTCGGCC TGGACCCGGC CAAGGTCAAC CCAAACGGTT CGGGCATTTC GCTCGGCCAC CCGATCGGCG CAACGGGTGC GCTTATCACG GTCAAGGCGT TGCACGAGCT GCAGCGCATC GGTGGTCGCT ACGCGCTGGT GACCATGTGT ATTGGTGGAG GACAGGGCAT TGCGGCGGTG TTCGAGCGCA TCTGA
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Protein sequence | MAREVVVVSG VRTAIGTFGG SLKDVAPCEL GALVVREALA RAGVKGEDVG HVVFGHVINT EPRDMYLSRV AAVNGGVSAE TPAFNVNRLC GSGLQAVVSA AQTVLLGDAD IAIAGGAESM SRAPYLAPAA RWGSRMGDAK MVDMMLGALH DPFHTIHMGV TAENVAREFG ISREQQDQTA LESHQRASRA IQAGYFKDQI VPVTIKSRKG DIQFDTDEHV RHDATIDDMT KLKPVFTKEN GTVTAGNASG LNDAGAALVL MERSVAEKRG LKPLARLVSY GHAGVDPKIM GIGPVPATRK ALERAGLSVK DLDVIEANEA FAAQACAVTK ELGLDPAKVN PNGSGISLGH PIGATGALIT VKALHELQRI GGRYALVTMC IGGGQGIAAV FERI
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