| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1903 |
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| Symbol | ispD |
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| ID | 6287755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 2004529 |
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| End bp | 2005287 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642625467 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_001899470 |
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| Protein GI | 187928983 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.393651 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGATTT CACACCCTGG CCGACGCCGT TTTGCGCTGA TTCCCTCGGC CGGCACCGGC
TCCCGCGCCG GCGGCGATCT GCCCAAGCAA TATCAGGTGA TTGCCGGGCG GCCGATGTTG
TGGCACACGG CGCAGGCATT CCTGGCCAGC CCCGAAATCG ACACCGTGCT GGTCGTGACA
ACGCCCGGCG CACAGCCGCT CGTGCAGCGC TTTCCCGAGG GCGGTTTCAA CGCGCCCAAG
CTGGTGGAGG TCGATTGCGG CGGCGACTCG CGCCACGCAT CCGTCACGCA TGGGCTGGCG
GCGTTGCGTG GTCTCGGTGC GCACGATGAC GACTGGGTGC TCGTGCATGA TGCGGCGCGT
CCGGGCCTGA CGCCCGCACT GGTCGCGCGT TTGGTCGCGG CCGTGGAGGC CGGAGGCACG
CAAGCTGCGG GAGGCATCCT TGCGCTACCC GTGGCAGATA CGCTCAAACG TGCCGATGCG
GCTCAGCACA TCAACGCCAC CGTGCCGCGC GATGGCCTGT GGCAAGCGCA GACGCCGCAG
ATGTTTCCGC TTGGCCTGCT GGAGCGCGCC TTGCGGGAGG CGCTGTTGCA ACAGCGCATC
GTCACCGACG AAGCCAGCGC CATTGAAGCC GCCGGTCACC CGCCGCTGCT TGTGCCGGGG
GCGCTGCGCA ACTTCAAGGT GACGTATTCC GACGATTTCG CACTCGCCGA GGCCATCCTC
GCGCAGCGCG CACAACCCAA CGAGGCATCG CAAGCATGA
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| Protein sequence | MSISHPGRRR FALIPSAGTG SRAGGDLPKQ YQVIAGRPML WHTAQAFLAS PEIDTVLVVT
TPGAQPLVQR FPEGGFNAPK LVEVDCGGDS RHASVTHGLA ALRGLGAHDD DWVLVHDAAR
PGLTPALVAR LVAAVEAGGT QAAGGILALP VADTLKRADA AQHINATVPR DGLWQAQTPQ
MFPLGLLERA LREALLQQRI VTDEASAIEA AGHPPLLVPG ALRNFKVTYS DDFALAEAIL
AQRAQPNEAS QA
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