Gene Rpic_1900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1900 
Symbol 
ID6287752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2002794 
End bp2003342 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content60% 
IMG OID642625464 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_001899467 
Protein GI187928980 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0450] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.731629 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.215891 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACCA TTGGTGACAA GCTCGAACCG TTCAAGGTCG TCGGCGTCAA GCCCGGGTTC 
AACAATCACG AAGAGAACGG CGAGTCGGCG TTCGAGGACA TCACCGAGAC CTCGTTCCCG
GGCAAATGGA AGGTCATCTT TTTCTATCCG AAGGACTTCA CGTTCGTCTG CCCGACCGAG
ATCGTTGCCT TCGCCAAACT GAACGATGAC TTTGCCGACC GCGACACCAT CGTGCTCGGC
GGCTCGACCG ACAATGAATT CGTCAAGCTC GCATGGCGCC GCGAGCACAA AGACCTGAAC
AAGCTCAACC AATGGTCGTT TGCCGACTCG ACGGGTGCCC TGGTCGACCA GCTTGGCGTA
CGCGAGCATG AGGCCGGCGT TGCGTTGCGC GCCACCTTCA TCGTCGACCC GGACAACGTC
ATCCAGCACG TGTCGGTCAA CAACCTGAAC GTGGGTCGCA ACCCGGACGA AGTGCTGCGC
ATTCTCGACG GCCTGCAGAC GGACGAGTTG TGCCCGTGCA ACCGCGCAGT CGGCGGTGCG
ACGCTGTAA
 
Protein sequence
MKTIGDKLEP FKVVGVKPGF NNHEENGESA FEDITETSFP GKWKVIFFYP KDFTFVCPTE 
IVAFAKLNDD FADRDTIVLG GSTDNEFVKL AWRREHKDLN KLNQWSFADS TGALVDQLGV
REHEAGVALR ATFIVDPDNV IQHVSVNNLN VGRNPDEVLR ILDGLQTDEL CPCNRAVGGA
TL