| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1898 |
|---|
| Symbol | ompR |
|---|
| ID | 6288677 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 2000393 |
|---|
| End bp | 2001115 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642625462 |
|---|
| Product | osmolarity response regulator |
|---|
| Protein accession | YP_001899465 |
|---|
| Protein GI | 187928978 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.065084 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.515659 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAATT CCGGTCAAAA GATTCTCGTC GTCGACGACG ACCCCCGCCT GCGCGACCTG
CTGCGCCGCT ACCTGGGGGA ACAGGGCTTC ACCGTGCTGG TGGCGGAAAA CGCCACGGCC
ATGAACAAAC TCTGGCTGCG CGAGCGCTTC GACCTGCTCG TGCTTGACCT GATGATGCCG
GGTGAAGACG GCCTGTCGAT CTGCCGTCGC CTGCGCGGCG CGAACGATCA GACGCCGATC
ATCATGCTCA CCGCCAAGGG CGAAGACGTC GACCGCATTG TCGGCCTTGA AATGGGCGCG
GACGATTACC TCCCCAAACC GTTCAACCCC CGCGAACTGA TTGCGCGCAT CCACGCCGTG
CTGCGCCGCC GCGGCCCCGC CGAAATCCCG GGTGCGCCGT CCGAGACGCC GGAAACGTTC
GCTTTTGGCG ATTTCGTTCT CAACCTGGCC ACGCGCACGC TCAAGAAAAA CGACGAAGAG
ATCACGCTCA CGACGGGCGA ATTCTCCGTG CTCAAGGTGT TTGCACGCCA TCCGCGCCAA
CCCCTATCGC GCGAGAAGCT GATGGAAATG GCGCGCGGCC GCGAATACGA AGTGTTCGAT
CGCAGCCTTG ATGTGCAGAT TTCGCGTCTG CGCAAGCTGA TTGAACCTGA CGCCAGCAAC
CCGCGCTTCA TTCAGACCGT GTGGGGCCTG GGCTACGTGT TCATTCCCGA CGGCGCCAAG
TAA
|
|---|
| Protein sequence | MENSGQKILV VDDDPRLRDL LRRYLGEQGF TVLVAENATA MNKLWLRERF DLLVLDLMMP
GEDGLSICRR LRGANDQTPI IMLTAKGEDV DRIVGLEMGA DDYLPKPFNP RELIARIHAV
LRRRGPAEIP GAPSETPETF AFGDFVLNLA TRTLKKNDEE ITLTTGEFSV LKVFARHPRQ
PLSREKLMEM ARGREYEVFD RSLDVQISRL RKLIEPDASN PRFIQTVWGL GYVFIPDGAK
|
|---|
| |