| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1893 |
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| Symbol | |
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| ID | 6289660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 1994622 |
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| End bp | 1995830 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642625457 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001899460 |
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| Protein GI | 187928973 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.227434 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGCGT TGCGTTTGCC GTACCCGCAT TCCGACTTCA CCGGTTTCTC CGACACGCGA
TCTCGGCCGC GCCGGCGTTC ATTGCCGACA GCGGCATCGG CGGCTTTGCT GGCCGGCGCG
GCGCTACTGG CCGGCTGCAG CAAGGAGGCA CCCAAGGCGC CCGTGGTGCG CCCGGTGCGG
ACCATGACAG TGACCAGCGA GCAGGGCGCC GGCACAGCGG AATTCTCCGG CGACGTACGC
CCGCGCATTG AATCTCGCCT GGGCTTCCGC GTGCCCGGCA AGATCGTTGC CCGGCTGGTG
GACGTCGGTG CCACGGTCAA GAAAGGCCAG GTGCTGGCGA GGTTGGACCC CACGGATCTG
GCCCTCGCCC AGCAATCGGC CCAGGCGCAG TTATCGGCGG CCAAGACTGA TCGCGATCTG
GCCGCGGCTG ACCTCAAGCG CTATTCCGAA CTGTTCGCCA AGGGTTTCAT CAGCGCGGCT
GAGCAGCAAC GCCATCAAGC CAACTATGAC GCCGCGCAAG CCCGCTACGA GCAGGCCGGA
GCTGGCTATC GCAACCAGGT GAATCAAGCC GGCTATGCCA CGCTCGAAGC CGACGCCGAT
GGCGTGGTGA CGGGCGTCGA CGCCGAAGTC GGACAGGTGG TGTCCGCAGG CCAACCGGTG
GTGCGCGTGG CGCAAACGGC AGAGAAGGAA GTCGTGGTCG GCATTCCCGA GGATCAGGTG
GACACGCTGC GCAAATCGCC CGAGGTGAGC GTGAAGCTGT GGGCCGATCA GTCGCGCAGC
ATTCCGGCCA AGGTGCGCGA GATTGCGCCG GCAGCCGACC CGGTCACACG CACGTACACC
GTCAAGATTT CGGTACCGAA TCCACCGCCG GAACTCAAGC TTGGCATGAC CGCAGCGGCC
ACCTTTGTGC GGCCCGGCGG CGGTGGCGAT AGCGGCGGCA TGGGCGTGCG GGTGCCGATG
AGCGCGCTGC TCCAGGATCA AGGCAAAAAC GTGGTCTGGC TGTACGACGC CGCATCGCAA
ACGGTGAAGC CCGTGCCGGT GACGGTGGGC GCGCCGCGCG ACAACGTGCT ACTGGTGACG
AGCGGCCTGC AGCCCGGCCA GACGATCGTG ACCGCTGGCG TGCACTTGCT CAAGGCAGGC
CAGAAGGTGA TGCCGATGGC GCCAGCCGAT CAGCCGTCGG CGCAGTCCGC CATCACGCCG
CGCCGGTAA
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| Protein sequence | MPALRLPYPH SDFTGFSDTR SRPRRRSLPT AASAALLAGA ALLAGCSKEA PKAPVVRPVR
TMTVTSEQGA GTAEFSGDVR PRIESRLGFR VPGKIVARLV DVGATVKKGQ VLARLDPTDL
ALAQQSAQAQ LSAAKTDRDL AAADLKRYSE LFAKGFISAA EQQRHQANYD AAQARYEQAG
AGYRNQVNQA GYATLEADAD GVVTGVDAEV GQVVSAGQPV VRVAQTAEKE VVVGIPEDQV
DTLRKSPEVS VKLWADQSRS IPAKVREIAP AADPVTRTYT VKISVPNPPP ELKLGMTAAA
TFVRPGGGGD SGGMGVRVPM SALLQDQGKN VVWLYDAASQ TVKPVPVTVG APRDNVLLVT
SGLQPGQTIV TAGVHLLKAG QKVMPMAPAD QPSAQSAITP RR
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