Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1888 |
Symbol | |
ID | 6288380 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 1987481 |
End bp | 1988857 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642625452 |
Product | phosphate-selective porin O and P |
Protein accession | YP_001899456 |
Protein GI | 187928969 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG4942] Membrane-bound metallopeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00748844 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.621098 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGAA CCGCCTTGTC GGTAGCCGCC GCCATTGCGC TGATGGGGGC CGGCGCAGCC AATGCCGCCA CCACCGCGCA ACTCGAACAG AAACTCGACG CCATGGCCGC GCAGATTGAA GCGCTCAAGG CCGAACTGAA AGAGGTGAAG GCGCAGAACG CGACGCTCGC CACGCAGCAG CAGACGCAGG CGAAGGCACA GGCACAGCAA ACCGCGGCCC TGCAAGACGT GCAGCAGACC GTGCAGACGG CACAGCTCGC CTCGACCAGG CCGTCGCCGC TGGACAACCT CACGCTGTGG GGCTACGGCG AAGCCAACTA CAGCCGCCCG ACGCGCCGTT CCGAAGACAC CAAGTTCGAC CTCGCGCGCG CAGTGTTCGG TATCGGCTAC AAGTTCGACG ACAAGACGCG CTTCAACTCC GAATTCGAGA TCGAGCACGC CATCACGTCG GCCACCGACT CGGGTGAATT CGAAGTCGAG CAGTTCTACA TCGACCACAA GCTGACCGAC AAGATCGGCC TGAATGCAGG CCTGTTCCTG ATCCCAGCGG GGTTCATCAA CCGCAACCAT GAGCCGACCA ACTACTACGG CGTGCATCGC AACTTTGTCG AGACGCTGAT CATCCCGAGC ACGTGGCGTG AGGGCGGTCT CTCGCTGTAC GGCGATACCG ATTTCGGCCT GAACTGGAAT GTGGGTCTGA CTACCGGGCT GGACCTGGCC AAGTGGAACT TCAACCCGGA GAACCCGCTG TTTAAGTCCG CGCTGGAGAT GCAGAACAAC GCCATCGCCC CGATGCAGAC CTCGCACCAG GAACTGGGGC TGGCCAACGC CAAGAACCTG TCGCAGTATG TGGCGCTGAA CTACACCGGT ATTTCGGGCG TAACGCTGGG CGGCTCGGTC TTCACGGGCA AGAGCAGCCG GTCGAGCACG GAAGCCGTGC TGCCTGAACA GCGCGCCACG CTGTACGAAG CGCACGCGCG CTGGACACCG GGCAAGTGGG ATCTGTCTGC CCTGTATGCA CGCGGTACGT TCAGCAACAC CGCTGCCGCC AATCAGCTGA ACCCGGGTGC CGCCAACCCG ATGCCGGCGG CGTTCTACGG CTGGTATGCA CAGGCGGCCT ACAACCTGTG GCAGAAGGGC GACTACCGCT TCGCGCCGTT CGTCCGCTAT GAACGCTACA ACATGGCCGA GAAGTACGAA GGTCTGGCTC CGGGCTTCAC GATGCCTGCC GGTTGGCCCT CGCTGTCGGA CACCGTGTAC ACCATCGGCG CGAACTTCTA TCTGAACCCG AACGTGGTCT TCAAGGTGGA CTACCAGCGC TTCAAGCAGA ACCGCGATTT CTCGCGTGTG GATCTGGGCC TGGGCGTGTC GTTCTAA
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Protein sequence | MKRTALSVAA AIALMGAGAA NAATTAQLEQ KLDAMAAQIE ALKAELKEVK AQNATLATQQ QTQAKAQAQQ TAALQDVQQT VQTAQLASTR PSPLDNLTLW GYGEANYSRP TRRSEDTKFD LARAVFGIGY KFDDKTRFNS EFEIEHAITS ATDSGEFEVE QFYIDHKLTD KIGLNAGLFL IPAGFINRNH EPTNYYGVHR NFVETLIIPS TWREGGLSLY GDTDFGLNWN VGLTTGLDLA KWNFNPENPL FKSALEMQNN AIAPMQTSHQ ELGLANAKNL SQYVALNYTG ISGVTLGGSV FTGKSSRSST EAVLPEQRAT LYEAHARWTP GKWDLSALYA RGTFSNTAAA NQLNPGAANP MPAAFYGWYA QAAYNLWQKG DYRFAPFVRY ERYNMAEKYE GLAPGFTMPA GWPSLSDTVY TIGANFYLNP NVVFKVDYQR FKQNRDFSRV DLGLGVSF
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