| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1878 |
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| Symbol | |
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| ID | 6287213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 1979469 |
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| End bp | 1980788 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642625442 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_001899446 |
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| Protein GI | 187928959 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.232309 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAGTC TGACCCACCA GCATCGCGCG TCGCCCACCG CACCGCCCGC CCCGGGACAC
CATGAAGTTG CCCCGGCAGA GATTGCCATA GGCGTCGTGA TCGGGCGCGC GTCGGAGTAC
TTCGATTTTT TCGTCTACGG CATCGCGTCG GTGCTGGTGT TCCCTTCGGT CTACTTTCCG
TTTGCCAGTG AATTGGCCGG TCTGCTGTTC AGCTTCACGG TCTTCTCGTT CGCCTTTATC
GGGCGCCCGT TCGGCACGGC GCTGTTCATG CGCATCCAGC GCCGATGGGG GCGCAGTACC
AAGCTGACGG CATCGTTGTT CCTGCTCGGC ACAGCTACGG TGGGCATTGC GTTCTTGCCG
TCGTACGCAT CGATCGGCCA TTCGGCAATC TATCTGCTGG CGCTCTTCCG CTTCATGCAG
GGCATCGCGT TTGGCGGCTC GTGGGATGGC CTGCCGTCGC TGCTGGCCTT GAACGCGCCC
GAAAACAAGC GCGGCTGGTA CGCCATGGTG GGGCAACTGG GCGCGCCCAC CGGCTTCATC
ATTGCCGGAG CGCTGTTCCT CTTCCTCTAT ACCAGCCTGA CGTTTCAGGA ATTCATCGAA
TGGGGCTGGC GCTATCCGTT CTACGTCGCC TTTGCCATCA ACGTGGTGGC GCTGTTTGCG
CGGCTGCGGC TGGTGGTCAC GCACGAATAC ACGCAACTGC TTGAGGAAGA AGAGCTGGAA
CCGATCAGCA CCCTGCAGAT GGTCAACGCG CAGGGGTTCA ACATCTTCCT GGGGGCCTTT
GCCGCGCTGG CCAGCTATGC GCTGTTCCAC CTGGTCACCG TGTTTCCGCT GTCATGGGTG
TCGCTGCGCA AGACACAGAG CGTGCCTGCC GTGCTGACCG TCCAGATCAT CGGCGCTGCG
ATTGCGTTCG TGGGTACGCT GGTTTCCGGC CTGATTGCAG ACCGGTTTGG TCGACGCACC
ACCTTGGCGG CCATGGCCGT GCTGATTGGC ATCTTCAGCC TGGCCGCACC TTGGCTGCTC
GATGGCGGTG TTGCGGGCCA GGACATTTTC ATCCTGGTCG GCTTCGGTCT GCTGGGGCTG
TCCTATGGCC AGGCGGCCGG CGTGGTGACG TCCAACTTTG AGAGCCGATT CCGCTATACC
GGTGCCGCCC TGACGACCGA TTTCGGCTGG CTGTTCGGTG CGGCATTCGC ACCGCTCGTG
GCGCTAGGCT TGTCGTCGCT GTTCGGACTT GGCGCGGTCA GCCTGTACCT GCTCTCAGGG
GTGGTTGGGA CGCTGGTGGC GCTGCGGATC AATAAGGCGC TTGGGACACC GGATTCCTAA
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| Protein sequence | MASLTHQHRA SPTAPPAPGH HEVAPAEIAI GVVIGRASEY FDFFVYGIAS VLVFPSVYFP
FASELAGLLF SFTVFSFAFI GRPFGTALFM RIQRRWGRST KLTASLFLLG TATVGIAFLP
SYASIGHSAI YLLALFRFMQ GIAFGGSWDG LPSLLALNAP ENKRGWYAMV GQLGAPTGFI
IAGALFLFLY TSLTFQEFIE WGWRYPFYVA FAINVVALFA RLRLVVTHEY TQLLEEEELE
PISTLQMVNA QGFNIFLGAF AALASYALFH LVTVFPLSWV SLRKTQSVPA VLTVQIIGAA
IAFVGTLVSG LIADRFGRRT TLAAMAVLIG IFSLAAPWLL DGGVAGQDIF ILVGFGLLGL
SYGQAAGVVT SNFESRFRYT GAALTTDFGW LFGAAFAPLV ALGLSSLFGL GAVSLYLLSG
VVGTLVALRI NKALGTPDS
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