Gene Rpic_1877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1877 
Symbol 
ID6288035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1978260 
End bp1979312 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content62% 
IMG OID642625441 
Productubiquinol oxidase, subunit II 
Protein accessionYP_001899445 
Protein GI187928958 
COG category[C] Energy production and conversion 
COG ID[COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 
TIGRFAM ID[TIGR01433] cytochrome o ubiquinol oxidase subunit II 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.209329 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACGCT TCAATGCAGT AGTGACACCC CTTGGAATTA CGGGAAGGTC GCTTTGGCGA 
GGTGCAGCAA TTGCCTTGTT GGTGACCCTT GCAGGCTGTA GCAACGCCGT GCTGTTGTCG
CCGGCTGGCG ACATGGCGGT GCGACAGCGG GACTTGATCA TCATCGCGAC ATGTCTGATG
TTGCTGATCA TCGTCCCGGT GATCGTTCTG ACCCTGTTGT TTGCATGGCG GTATCGGGAG
AGCGCTGAGA ACGCGCACTA CAACCCCGAT TGGGATCATT CCACCGTGCT GGAGCTGGCC
ATCTGGGCCG CGCCGCTCCT GATCATCATC ACGCTGGGCG CCGTCACCTG GGTTAGCACC
CATCAACTCG ATCCGTATCG GCCGCTGACG CGGCTGGATC AGGACCGTCC GGTGCCCGCC
GAGACCAAGC CGCTTACCGT TGAGGTGGTG GCAATGGACT GGAAGTGGCT GTTCGTCTAT
CCCGAGCAGG GCATTGCCAC CGTCAACGAG CTGGCCGCCC CGGTCGACCG GCCCATCGCG
TTCCGGATCA CAGCGACCAC GGTCATGAAC GCGTTCTTCG TGCCTTCTCT GGCGGGCATG
GTCTATGCCA TGCCGGGCAT GGAAACCAAG CTTCATGCGG TGATCAACCG GCCTGGCGTC
TATGACGGGC TCTCTTCCAA CTACAGCGGC GCGGGCTTCT CGCACATGCG GTTCAAATTC
CACGGACTGT CGAACGACGA GTTCGACCGG TGGGTCCAGC AGGTCAAGTC GTCGGGCACG
TCGCTGTCGA AGGACACCTA TCTGAAGCTG GCCAAGCCCA GCGAGAGCGA ACCGGTGCAG
CGTTACGCCA GCGTGGCGCC GGACCTCTAT GACCGCATCC TGAACCGCTG TGTGGATGGC
CAGGCATGCC TGGCCGACAC CATGGCGAGC AACCGCAACG TGAGGCGCTT CGACCCGTCG
GCGGAAATCT GTACCGCCAG CAATACGGCC GATGCCATGC CCATGTTTGC GCCGGATGCG
GCCATCAACG ACGGTCGAAG GTTGTTGCGG TAG
 
Protein sequence
MPRFNAVVTP LGITGRSLWR GAAIALLVTL AGCSNAVLLS PAGDMAVRQR DLIIIATCLM 
LLIIVPVIVL TLLFAWRYRE SAENAHYNPD WDHSTVLELA IWAAPLLIII TLGAVTWVST
HQLDPYRPLT RLDQDRPVPA ETKPLTVEVV AMDWKWLFVY PEQGIATVNE LAAPVDRPIA
FRITATTVMN AFFVPSLAGM VYAMPGMETK LHAVINRPGV YDGLSSNYSG AGFSHMRFKF
HGLSNDEFDR WVQQVKSSGT SLSKDTYLKL AKPSESEPVQ RYASVAPDLY DRILNRCVDG
QACLADTMAS NRNVRRFDPS AEICTASNTA DAMPMFAPDA AINDGRRLLR