Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1875 |
Symbol | |
ID | 6288033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 1975495 |
End bp | 1976160 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642625439 |
Product | cytochrome o ubiquinol oxidase, subunit III |
Protein accession | YP_001899443 |
Protein GI | 187928956 |
COG category | [C] Energy production and conversion |
COG ID | [COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 |
TIGRFAM ID | [TIGR02842] cytochrome o ubiquinol oxidase, subunit III |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0147055 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.117743 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAAA CGACCGCATC CCTGCATGTG ACCGGCCCCA CGGGTACTAC CACGGCGGAT GACGTACCGC CGGGCGGCTA CCAGTTCCAC GTCACCGAAG AACCGCACGT GCCAAACGGC ACGCTGCTCG GGTTCTGGCT GTACCTGATG AGCGATTGCC TGATCTTCGC GTGCCTGTTT GCCGCCTATG GCGTGCTGGG CCGCGAATAC GCAGGCGGCC CCACGGGGGC GGAACTCTTC GAGCTGCCGC TGGTGGCGTT GAACACGTCC TTCCTGCTGC TGTCGTCTAT TACGTACGGC TTTGCGATGC TGCAGTTGCA GCAGAACAAG GTCTCGGCCA TGCAGATCTG GCTGGCCATC ACGTGGGTCT TCGGTGCCGC ATTCCTGGCG GTGGAACTCT ATGAATTCGC GCATCTGATC CACGAGGGTG CCGGGCCCAC ACGGAGTGCA TTCCTGACTT CGTTCTTCTC ACTGGTCGGC ACGCACGGGC TGCACGTGAC GTTTGGCCTG ATCTGGCTTA TCGTGCTGAT GGTGCAGGTG TCGAAGCACG GTTTGATTAC GGCCAACAAG CGTCGCCTGA TGTGCCTGTC GATGTTCTGG CACTTTCTGG ACGTTGTCTG GATCGGCGTC TTTACCTTCG TCTACCTGAT GGGAACGCTG CCATGA
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Protein sequence | MAETTASLHV TGPTGTTTAD DVPPGGYQFH VTEEPHVPNG TLLGFWLYLM SDCLIFACLF AAYGVLGREY AGGPTGAELF ELPLVALNTS FLLLSSITYG FAMLQLQQNK VSAMQIWLAI TWVFGAAFLA VELYEFAHLI HEGAGPTRSA FLTSFFSLVG THGLHVTFGL IWLIVLMVQV SKHGLITANK RRLMCLSMFW HFLDVVWIGV FTFVYLMGTL P
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