Gene Rpic_1875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1875 
Symbol 
ID6288033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1975495 
End bp1976160 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content60% 
IMG OID642625439 
Productcytochrome o ubiquinol oxidase, subunit III 
Protein accessionYP_001899443 
Protein GI187928956 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID[TIGR02842] cytochrome o ubiquinol oxidase, subunit III 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0147055 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.117743 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAA CGACCGCATC CCTGCATGTG ACCGGCCCCA CGGGTACTAC CACGGCGGAT 
GACGTACCGC CGGGCGGCTA CCAGTTCCAC GTCACCGAAG AACCGCACGT GCCAAACGGC
ACGCTGCTCG GGTTCTGGCT GTACCTGATG AGCGATTGCC TGATCTTCGC GTGCCTGTTT
GCCGCCTATG GCGTGCTGGG CCGCGAATAC GCAGGCGGCC CCACGGGGGC GGAACTCTTC
GAGCTGCCGC TGGTGGCGTT GAACACGTCC TTCCTGCTGC TGTCGTCTAT TACGTACGGC
TTTGCGATGC TGCAGTTGCA GCAGAACAAG GTCTCGGCCA TGCAGATCTG GCTGGCCATC
ACGTGGGTCT TCGGTGCCGC ATTCCTGGCG GTGGAACTCT ATGAATTCGC GCATCTGATC
CACGAGGGTG CCGGGCCCAC ACGGAGTGCA TTCCTGACTT CGTTCTTCTC ACTGGTCGGC
ACGCACGGGC TGCACGTGAC GTTTGGCCTG ATCTGGCTTA TCGTGCTGAT GGTGCAGGTG
TCGAAGCACG GTTTGATTAC GGCCAACAAG CGTCGCCTGA TGTGCCTGTC GATGTTCTGG
CACTTTCTGG ACGTTGTCTG GATCGGCGTC TTTACCTTCG TCTACCTGAT GGGAACGCTG
CCATGA
 
Protein sequence
MAETTASLHV TGPTGTTTAD DVPPGGYQFH VTEEPHVPNG TLLGFWLYLM SDCLIFACLF 
AAYGVLGREY AGGPTGAELF ELPLVALNTS FLLLSSITYG FAMLQLQQNK VSAMQIWLAI
TWVFGAAFLA VELYEFAHLI HEGAGPTRSA FLTSFFSLVG THGLHVTFGL IWLIVLMVQV
SKHGLITANK RRLMCLSMFW HFLDVVWIGV FTFVYLMGTL P