| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1867 |
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| Symbol | |
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| ID | 6288861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 1965578 |
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| End bp | 1967992 |
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| Gene Length | 2415 bp |
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| Protein Length | 804 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642625431 |
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| Product | ATP-dependent protease La |
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| Protein accession | YP_001899435 |
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| Protein GI | 187928948 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
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| TIGRFAM ID | [TIGR00763] ATP-dependent protease La |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0743782 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00647578 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCGGAA CCCAACTTTT ACCCGCTGAG CAGATTCGCC TGCCGCTGTT GCCGCTGCGT
GACGTCGTGG TGTTTCCGCA CATGGTGATT CCGCTGTTCG TGGGGCGCCC CAAATCCATC
AAGGCGCTGG AAGCTGCGAT GGAGGCGGGC AAGAGCATCA TGCTCGTGGC GCAAAAGACT
GCCGCCAAGG ACGAGCCGAC CGATAAGGAT CTGTATGAGG TCGGCTGTAT CGCCAACATT
CTGCAGATGC TGAAGCTGCC GGACGGCACC GTGAAGGTGC TGGTCGAGGG CACGCAGCGC
GCCAATATCC TGTCCGTCAC CGACGACGAA TCGCACTTCT TCTGCGAAGC TGTGCCCGTC
GGCCCGGAAC CCACTGAATC GGCTGAGACC GAGGCGCTGC GTCGCGCCAT CGTGTCGCAG
TTCGATCAGT ACGTGAAGCT GAACAAGAAG ATCCCGCCTG AAATCCTGAC TTCGTTGTCG
GGCATCGACG AGCCGGGTCG TCTGGCCGAC ACCATTGCTG CGCATCTGCC GATTAAGCTC
GAGCAGAAGC AGAAGATTCT CGAGATGTTC AATGTGACCG AACGTCTGGA GAGCCTGCTT
TCGCAGCTGG AAGGCGAGAT CGACATCCTG CAGGTGGAAA AGCGCATCCG TGGCCGCGTC
AAGCGCCAGA TGGAGAAGAG CCAGCGCGAG TACTACCTGA ACGAGCAGGT CAAGGCCATC
CAGAAGGAAC TGGGCGAAGG CGAGGAAGGC GCCGATCTCG AAGAGCTGGA CAAGAAGATC
AAGGCCGCCC GCATGCCGAA GGAGGCCAAG AAGAAGGCCG AGTCCGAGTT CAAGAAGCTC
AAGCTGATGT CGCCGATGTC GGCCGAGGCG ACGGTCGTGC GCAACTACAT CGACACGTTG
GTTGGTCTGC CGTGGCGCAA GAAGAGCAAG GTGAACAACG ATCTGTCGAA CGCCGAGCAG
GTGCTGGATC AGGACCACTA TGGTTTGGAG AAGGTCAAGG AACGCATCCT TGAATACCTC
GCGGTGCAAC AGCGCGTCGA CAAACTGAAG GCGCCGATCC TGTGCCTCGT GGGGCCGCCG
GGGGTTGGCA AGACGTCGCT CGGGCAGTCG GTGGCGCGTG CAACGAACCG CAAGTTCGTG
CGCATGGCGC TGGGTGGCGT GCGTGACGAG GCCGAGATTC GCGGTCACCG CCGTACGTAC
ATCGGGTCGA TGCCGGGCAA GATCCTGCAG AGCCTGACGA AGGTCGGCGT GCGCAATCCG
TTGTTCCTGC TGGACGAGAT CGACAAGATG GGTGCGGATT TCCGCGGCGA TCCGTCGTCG
GCCCTGCTCG AAGTGCTGGA CCCGGAACAG AACCACACGT TCCAGGACCA CTACATCGAA
GTGGACTTCG ACCTGTCGGA TGTGATGTTC GTGGCGACGT CGAACTCGCT GAACATTCCG
GCGCCGCTGC TGGACCGGAT GGAAGTGATT CGTCTGTCGG GCTACACGGA AGACGAAAAG
GTCAACATCG CCCGTCGCTA CTTGCTGCCC AAGCAGATCA AGAACAATGG TCTGAAAGAG
GGCGAGATCG AGGTGACCGA AGCCGCGCTG CGCGACATCA TCCGCTACTA CACGCGGGAA
GCTGGTGTGC GTTCCCTGGA ACGCGAGGTC TCGAAGATCT GCCGCAAGGT CGTCAAGCAA
CTGCTGCTGA AGAAGGAAGC CAATACGTCC GTGAAGGTGG ATTCGGACAA CCTGGACAAA
TTCCTTGGCG TGCGTCGTTT CGACTTCGGT CTGGCCGGCA AGGAAGACCA GGTGGGCCAG
GTGACTGGTT TGGCATGGAC CGAAGTGGGC GGCGATCTGC TGACCATCGA GGCAGCGCTG
ATGCCGGGCA AGGGCAACAT CACCCGCACC GGTTCGTTGG GCGACGTGAT GAAGGAGTCG
GTTGAGGCTG CGCGGTCGGT GGTGCGTTCG CGTTCGGCAC GGCTGGGTAT CAAGGATGAG
ATGTTCGAGA AGCGCGACAT TCACATCCAC GTGCCCGAAG GTGCGACGCC CAAGGATGGC
CCTTCGGCGG GTATTGCGAT GACGACGGCG CTGGTGTCGG TGCTGACCGG GATCCCGGTG
CGCGCTGATG TGGCGATGAC CGGCGAAATC ACCCTGCGCG GCGAAGTGCT GCCGATCGGC
GGCTTGAAGG AAAAGCTGCT GGCTGCACAC CGCGGCGGCA TCAAGCTGGC GCTGATTCCG
GAGGAGAACG TCAAGGACTT GGCGGACATT CCGGACAACG TGAAGAACAG CATCGAGATT
CAGCCGGTGC GCTGGATCGA CAAGGTGCTG GAACTCGCGC TGGTGCGCAA GCCGGAGCCT
CTTCCGGAGG AAGAAGCCAA GCCGGCGCCC GCCCAGGGCG ATGACGGCAA GTCGCAGGAA
ATGGTGCATC ACTGA
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| Protein sequence | MSGTQLLPAE QIRLPLLPLR DVVVFPHMVI PLFVGRPKSI KALEAAMEAG KSIMLVAQKT
AAKDEPTDKD LYEVGCIANI LQMLKLPDGT VKVLVEGTQR ANILSVTDDE SHFFCEAVPV
GPEPTESAET EALRRAIVSQ FDQYVKLNKK IPPEILTSLS GIDEPGRLAD TIAAHLPIKL
EQKQKILEMF NVTERLESLL SQLEGEIDIL QVEKRIRGRV KRQMEKSQRE YYLNEQVKAI
QKELGEGEEG ADLEELDKKI KAARMPKEAK KKAESEFKKL KLMSPMSAEA TVVRNYIDTL
VGLPWRKKSK VNNDLSNAEQ VLDQDHYGLE KVKERILEYL AVQQRVDKLK APILCLVGPP
GVGKTSLGQS VARATNRKFV RMALGGVRDE AEIRGHRRTY IGSMPGKILQ SLTKVGVRNP
LFLLDEIDKM GADFRGDPSS ALLEVLDPEQ NHTFQDHYIE VDFDLSDVMF VATSNSLNIP
APLLDRMEVI RLSGYTEDEK VNIARRYLLP KQIKNNGLKE GEIEVTEAAL RDIIRYYTRE
AGVRSLEREV SKICRKVVKQ LLLKKEANTS VKVDSDNLDK FLGVRRFDFG LAGKEDQVGQ
VTGLAWTEVG GDLLTIEAAL MPGKGNITRT GSLGDVMKES VEAARSVVRS RSARLGIKDE
MFEKRDIHIH VPEGATPKDG PSAGIAMTTA LVSVLTGIPV RADVAMTGEI TLRGEVLPIG
GLKEKLLAAH RGGIKLALIP EENVKDLADI PDNVKNSIEI QPVRWIDKVL ELALVRKPEP
LPEEEAKPAP AQGDDGKSQE MVHH
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