| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1862 |
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| Symbol | |
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| ID | 6287181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 1960531 |
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| End bp | 1961241 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642625424 |
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| Product | ABC transporter related |
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| Protein accession | YP_001899430 |
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| Protein GI | 187928943 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4181] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0000203223 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGTCTT CCGCTACCTG GGTGATTGAA GTCGATTCGC TGCACAAGAC CGTGCGCGAT
GCCACCGGTG AGTTGCCTAT TCTGAGCGAT GTTGCCTTCC GTGTGGAAAG GGGCGAGACA
CTGGCCATTG TTGGCGCTTC CGGCTCGGGC AAATCGACGT TGCTAGGGTT GCTCGCCGGC
CTGGACTTGC CGACATCGGG TTCGGTCAAG CTGCTGGGCA ACGACTTGTT CGTCTTGGAT
GAGGATGGCC GTGCGGCCGT GCGCGGCAGC CACGTGGGCT TTGTCTTCCA ATCGTTCCAG
CTGCTGCCCC ATCTGACGGC GCTTGAGAAC GTGATGTTGC CGCTGGAGTT GCAGGGCGAC
GTGAGCACCG CCGAAATGCG GCGTCGCGCA ACGGTTCTGC TGGAGCGCGT TGGCCTGGGT
GCGCGGCTGT CGCACTATCC AAAGACGCTT TCGGGCGGCG AACAGCAACG CGTGGCCTTG
GCACGTGCGT TTGTGACCGA GCCCGACATT CTCTTTGCCG ATGAACCGAC CGGCAGTCTC
GACACCGCCA CGGGCGAGGC CGTGATCGCG CTGATGTTTG AACTCAACCG TAGTGCCGGC
TCCACGCTGG TGCTGGTGAC GCACGACCGC TCCGTGGCGG CGCGTTGCAG CCGCATTCTC
ACCATCGAAG CAGGGCATCT CGTGGGCGAC GAGGCTGTCA CCGAACTCTG A
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| Protein sequence | MSSSATWVIE VDSLHKTVRD ATGELPILSD VAFRVERGET LAIVGASGSG KSTLLGLLAG
LDLPTSGSVK LLGNDLFVLD EDGRAAVRGS HVGFVFQSFQ LLPHLTALEN VMLPLELQGD
VSTAEMRRRA TVLLERVGLG ARLSHYPKTL SGGEQQRVAL ARAFVTEPDI LFADEPTGSL
DTATGEAVIA LMFELNRSAG STLVLVTHDR SVAARCSRIL TIEAGHLVGD EAVTEL
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