Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1861 |
Symbol | pgi |
ID | 6289858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 1958902 |
End bp | 1960521 |
Gene Length | 1620 bp |
Protein Length | 539 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642625423 |
Product | glucose-6-phosphate isomerase |
Protein accession | YP_001899429 |
Protein GI | 187928942 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0166] Glucose-6-phosphate isomerase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0000375128 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCCTACAG CCCTACCCGC CTGGCAGTCC CTCACGCAAC ATGCAGAATC GATCCGCGCG ACACATATGC GCGACTGGTT TGCCGCGCCG GACGCCGAAG AACGGGTACG TGCCTTCACG CTGGAGGCCG CTGGCCTGAC GGTCGATTAC TCAAAAAACC GCATCACCCC CGACACGCTT TCCCAACTGC TGCAACTTGC TGAGGAAGCC GGCGTGCTCA CCCTGCGCGA CGCCATGCTG CGTGGCGAAC GCATCAACAA CACCGAGCAC CGCGCCGTCT TGCACGTGGC CCTGCGTGGC CGCGCTGAAC ACGACTATCG TGCCGACGGC GAGCCCGTCA TGCCCGAAGT GCTGCGCGTG CGCGCGCAGA TGCGCGACTT TGCCAACCGT GTGCACAGCG GCGCATGGAC AGGCCATTCC GGACGGCGCA TCACGGACGT GGTGAACATC GGCATCGGCG GATCGGACCT CGGCCCGCGG ATGGTATGCC GTGCGCTCGA CCACCTTGCC GTGCCGCAGG TGCGCGTGCA TTTCGTCTCC AACGTCGACG GCACGGACCT GGCCGAAACG CTCGACCATC TGAACCCCGA CACCACGCTC GCCATCGTCT GTTCCAAGAC GTTCACCACG CTGGAAACGA TGGCCAACGC GCACAGCATG CGCAGGTGGT TTGTCGACCA CGGCGTCGCG GAAAGCCAGC TTAAGCACCA CTTCGTCGCT GTCTCCACCA ACCGCGAGGC CGTCGTGCAG TTCGGCATCG ACCCGGACAA CATGTTCACG TTCTGGGATT GGGTTGGCGG GCGGTTCTCG CTGTGGTCGG CCGTGGGCCT GTCGATCGTG CTGGCGATCG GGCCGCAGCA GTTTGAAGCG ATGCTCGACG GCGCGCGTGC GATGGACCGC CACTTTGCGA CGGCCGCGCC GCGCGAGAAC CTCCCGCTCA TTCTCGGGAT GCTGTCGGTC TGGTATCGCG GCTTCTTCGA TGCGGCGAGC GCATGCACCG TGCCCTACTG CGCGCCGCTG GAACTGCTGA CCGACTTCAT GCAACAGTTG GAGATGGAGA GCAACGGCAA ATCGGTCCAG CGCAACGGCG CGGCCATCGA TACCGACACC GGCCCCATCG TCTGGGGCAC GGCCGGCACC AACGGGCAGC ATGCGTATTT CCAGTTGATC CACCAGGGCT CGCAGATCGT GCCGGTGGAT TTCATCACCA CGCTCGAGCC GGTGCGCAAC CTGCCTGGCC ACCATGCCAA GCTGCTCGCC AACTGCTTCG CGCAGGGCGA GGCACTGCTG CTGGGGCGCA CCGCCGAGGA GGTCCGCGCG GGCGGCGTCA CCGACGAAGC GCTGGTGCCG CATATGGTGT TCGAAGGCAA TCGCCCGAGC ACGACCATCC TGATGGAGCG GCTGGACGCT GCCTCACTCG GCGCGCTCAT CGCCTGCGCC GAGCACCGCA CCTTCGTGCA GGGCGCGGTC TGGAACATCA ACTCGTTCGA TCAGTGGGGC GTGGAGCTTG GCAAGAAACT CGCCAAGCCG ATCCAGGCGG AACTGGAAGG TGCGCCGGCC TCTGTGGCGC ATGATGCGTC GACGGTGGCG TTGATTCGCC GCGCCAAAGC CGCGCTCTGA
|
Protein sequence | MPTALPAWQS LTQHAESIRA THMRDWFAAP DAEERVRAFT LEAAGLTVDY SKNRITPDTL SQLLQLAEEA GVLTLRDAML RGERINNTEH RAVLHVALRG RAEHDYRADG EPVMPEVLRV RAQMRDFANR VHSGAWTGHS GRRITDVVNI GIGGSDLGPR MVCRALDHLA VPQVRVHFVS NVDGTDLAET LDHLNPDTTL AIVCSKTFTT LETMANAHSM RRWFVDHGVA ESQLKHHFVA VSTNREAVVQ FGIDPDNMFT FWDWVGGRFS LWSAVGLSIV LAIGPQQFEA MLDGARAMDR HFATAAPREN LPLILGMLSV WYRGFFDAAS ACTVPYCAPL ELLTDFMQQL EMESNGKSVQ RNGAAIDTDT GPIVWGTAGT NGQHAYFQLI HQGSQIVPVD FITTLEPVRN LPGHHAKLLA NCFAQGEALL LGRTAEEVRA GGVTDEALVP HMVFEGNRPS TTILMERLDA ASLGALIACA EHRTFVQGAV WNINSFDQWG VELGKKLAKP IQAELEGAPA SVAHDASTVA LIRRAKAAL
|
| |