Gene Rpic_1861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1861 
Symbolpgi 
ID6289858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1958902 
End bp1960521 
Gene Length1620 bp 
Protein Length539 aa 
Translation table11 
GC content66% 
IMG OID642625423 
Productglucose-6-phosphate isomerase 
Protein accessionYP_001899429 
Protein GI187928942 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0166] Glucose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0000375128 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCTACAG CCCTACCCGC CTGGCAGTCC CTCACGCAAC ATGCAGAATC GATCCGCGCG 
ACACATATGC GCGACTGGTT TGCCGCGCCG GACGCCGAAG AACGGGTACG TGCCTTCACG
CTGGAGGCCG CTGGCCTGAC GGTCGATTAC TCAAAAAACC GCATCACCCC CGACACGCTT
TCCCAACTGC TGCAACTTGC TGAGGAAGCC GGCGTGCTCA CCCTGCGCGA CGCCATGCTG
CGTGGCGAAC GCATCAACAA CACCGAGCAC CGCGCCGTCT TGCACGTGGC CCTGCGTGGC
CGCGCTGAAC ACGACTATCG TGCCGACGGC GAGCCCGTCA TGCCCGAAGT GCTGCGCGTG
CGCGCGCAGA TGCGCGACTT TGCCAACCGT GTGCACAGCG GCGCATGGAC AGGCCATTCC
GGACGGCGCA TCACGGACGT GGTGAACATC GGCATCGGCG GATCGGACCT CGGCCCGCGG
ATGGTATGCC GTGCGCTCGA CCACCTTGCC GTGCCGCAGG TGCGCGTGCA TTTCGTCTCC
AACGTCGACG GCACGGACCT GGCCGAAACG CTCGACCATC TGAACCCCGA CACCACGCTC
GCCATCGTCT GTTCCAAGAC GTTCACCACG CTGGAAACGA TGGCCAACGC GCACAGCATG
CGCAGGTGGT TTGTCGACCA CGGCGTCGCG GAAAGCCAGC TTAAGCACCA CTTCGTCGCT
GTCTCCACCA ACCGCGAGGC CGTCGTGCAG TTCGGCATCG ACCCGGACAA CATGTTCACG
TTCTGGGATT GGGTTGGCGG GCGGTTCTCG CTGTGGTCGG CCGTGGGCCT GTCGATCGTG
CTGGCGATCG GGCCGCAGCA GTTTGAAGCG ATGCTCGACG GCGCGCGTGC GATGGACCGC
CACTTTGCGA CGGCCGCGCC GCGCGAGAAC CTCCCGCTCA TTCTCGGGAT GCTGTCGGTC
TGGTATCGCG GCTTCTTCGA TGCGGCGAGC GCATGCACCG TGCCCTACTG CGCGCCGCTG
GAACTGCTGA CCGACTTCAT GCAACAGTTG GAGATGGAGA GCAACGGCAA ATCGGTCCAG
CGCAACGGCG CGGCCATCGA TACCGACACC GGCCCCATCG TCTGGGGCAC GGCCGGCACC
AACGGGCAGC ATGCGTATTT CCAGTTGATC CACCAGGGCT CGCAGATCGT GCCGGTGGAT
TTCATCACCA CGCTCGAGCC GGTGCGCAAC CTGCCTGGCC ACCATGCCAA GCTGCTCGCC
AACTGCTTCG CGCAGGGCGA GGCACTGCTG CTGGGGCGCA CCGCCGAGGA GGTCCGCGCG
GGCGGCGTCA CCGACGAAGC GCTGGTGCCG CATATGGTGT TCGAAGGCAA TCGCCCGAGC
ACGACCATCC TGATGGAGCG GCTGGACGCT GCCTCACTCG GCGCGCTCAT CGCCTGCGCC
GAGCACCGCA CCTTCGTGCA GGGCGCGGTC TGGAACATCA ACTCGTTCGA TCAGTGGGGC
GTGGAGCTTG GCAAGAAACT CGCCAAGCCG ATCCAGGCGG AACTGGAAGG TGCGCCGGCC
TCTGTGGCGC ATGATGCGTC GACGGTGGCG TTGATTCGCC GCGCCAAAGC CGCGCTCTGA
 
Protein sequence
MPTALPAWQS LTQHAESIRA THMRDWFAAP DAEERVRAFT LEAAGLTVDY SKNRITPDTL 
SQLLQLAEEA GVLTLRDAML RGERINNTEH RAVLHVALRG RAEHDYRADG EPVMPEVLRV
RAQMRDFANR VHSGAWTGHS GRRITDVVNI GIGGSDLGPR MVCRALDHLA VPQVRVHFVS
NVDGTDLAET LDHLNPDTTL AIVCSKTFTT LETMANAHSM RRWFVDHGVA ESQLKHHFVA
VSTNREAVVQ FGIDPDNMFT FWDWVGGRFS LWSAVGLSIV LAIGPQQFEA MLDGARAMDR
HFATAAPREN LPLILGMLSV WYRGFFDAAS ACTVPYCAPL ELLTDFMQQL EMESNGKSVQ
RNGAAIDTDT GPIVWGTAGT NGQHAYFQLI HQGSQIVPVD FITTLEPVRN LPGHHAKLLA
NCFAQGEALL LGRTAEEVRA GGVTDEALVP HMVFEGNRPS TTILMERLDA ASLGALIACA
EHRTFVQGAV WNINSFDQWG VELGKKLAKP IQAELEGAPA SVAHDASTVA LIRRAKAAL