Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1860 |
Symbol | |
ID | 6289857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 1957235 |
End bp | 1958830 |
Gene Length | 1596 bp |
Protein Length | 531 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642625422 |
Product | carbohydrate kinase, YjeF related protein |
Protein accession | YP_001899428 |
Protein GI | 187928941 |
COG category | [G] Carbohydrate transport and metabolism [S] Function unknown |
COG ID | [COG0062] Uncharacterized conserved protein [COG0063] Predicted sugar kinase |
TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related [TIGR00197] yjeF N-terminal region |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0000355774 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCCTCAC ACCCTAGCTG GCGCGAAATC CTGATCGACG GCGCACTGGC CGCACACCAC GGCGCCGACC TGCTCTTCGG CACAGCGGGC ATCCGCGCGC TGGAAGCAGC TGCGTACCGA ACCCTCGAAC CCTTCACCTT GATGGCCAGG GCGGGCGAAG CCGCCGCCGA CTGGCTGCAG ACGCGCGCGC CACACGGGCA TGTCCTGCTC GTTGCCGGCC CAGGCAACAA CGGTGGCGAT GCGCTCGTTG CGGCGACGGT GCTGCATCTG GCGGGGCGCG CCGTCACGGT GTGGCTTGCC GCAGACCCGG CCAAGCTGCC TGATGACGCG CGCCGCGCCT GGACGGAGGC TTGTGCCGCG AATGTCCCCA TTGAACCTCT GCACACGGCC GTTTCGGTGC CGGCGGCTGC CTCCGTCATC GTCGACGGCC TCTTTGGTAT CGGACTCGCC CGGCCGCTGA CGGGGTTGCA TGCCGCACTG GTCGACACCA TCAACGCCAG CGGCTTGCCG GTGTTTGCGC TGGACATTCC CTCGGGGCTG AACGGCGATA CGGGCCAGCC GCCCGCCCCA GATTCGCCCG TCATTCAGGC ACGCGCCACC ATCACGTTCC TCGCCGTCAA ACCGGGGTTG CTGACCGGTG ATGGCCGCGA CGCCACCGGC GACATCGCGC TGGCCGACTT GCAGGCTGCG CAAGCGGCTT ATGACGGCGT GATTGAAGCG GACGCCTTTG TCAACACGCC GTCACGCTGG CTTGCGCACG TGCCGCGCCG GCGGCATAAC GGCCACAAGG GCACATATGG CAGTGCGGCA ATCGTGGGCG GTGCGGCAGG CATGGTCGGA GCGCCGCTGC TGTCGGCGCG CGGAGCGCTC TATCTGGGCG CGGGCAAGGT GCACGTGGTC TCGCTTGCCG CCGATGCACC GCGCATCGAC CCCGCGCAAC CGGAATTGAT GCTGCACACC TGGGGCGCAC TCGATCTGGG CGGCATGCAG GCGCTGGCCG TGGGCCCCGG CATGGGTACC GGCAAGGAGT CGGAAGCCGC GCTCGAGCAT CTGCTGGACC GCATGCTGTC GGTGCGCACG CCCGCCGTGT TCGACGCCGA TGCACTGAAC CTCTTTGCGA AAACGCCCGC CCTGCTCGCG CGTCTCACGC AACTGGCCGG AAGCGGTGTG CCGTTGGTGC TGACGCCGCA TCCGCTGGAA GCCGCGCGAC TGCTGCATAC CGATGCGCTC GCCGTGCAGC ACGATCGGGT GTCCGCCGCC AAGGCGCTTG TCAATCGGAC GGGCGCGGTG GTCGTGCTCA AAGGCTCGGG CACAGTCATC GCGGCGCCTG GCATCCCGCC GGCCATCAAC CCAACCGGCA ACGGCGGGCT CGCCACCGGC GGCACGGGCG ATGTACTGAC CGGCATGATC GGCGCACTGC TTGCGCAAGG CATGGGCGCG CGTGAAGCTG CACTTGCGGC CGTCTGGCTG CATGGTCGTG CGGCCGATGA CCTTGTCCAC GCGGGTGTGG GCCCCATCGG GCTGCACGCA AGCGAGCTTT GCGTACCGGC ACGGCGTGCG CTCAACGCCT TGCTGGCGTC GGACGTTCGC CGATAG
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Protein sequence | MSSHPSWREI LIDGALAAHH GADLLFGTAG IRALEAAAYR TLEPFTLMAR AGEAAADWLQ TRAPHGHVLL VAGPGNNGGD ALVAATVLHL AGRAVTVWLA ADPAKLPDDA RRAWTEACAA NVPIEPLHTA VSVPAAASVI VDGLFGIGLA RPLTGLHAAL VDTINASGLP VFALDIPSGL NGDTGQPPAP DSPVIQARAT ITFLAVKPGL LTGDGRDATG DIALADLQAA QAAYDGVIEA DAFVNTPSRW LAHVPRRRHN GHKGTYGSAA IVGGAAGMVG APLLSARGAL YLGAGKVHVV SLAADAPRID PAQPELMLHT WGALDLGGMQ ALAVGPGMGT GKESEAALEH LLDRMLSVRT PAVFDADALN LFAKTPALLA RLTQLAGSGV PLVLTPHPLE AARLLHTDAL AVQHDRVSAA KALVNRTGAV VVLKGSGTVI AAPGIPPAIN PTGNGGLATG GTGDVLTGMI GALLAQGMGA REAALAAVWL HGRAADDLVH AGVGPIGLHA SELCVPARRA LNALLASDVR R
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