Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1851 |
Symbol | |
ID | 6286975 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 1941922 |
End bp | 1944951 |
Gene Length | 3030 bp |
Protein Length | 1009 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642625413 |
Product | transposase Tn3 family protein |
Protein accession | YP_001899419 |
Protein GI | 187928932 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4644] Transposase and inactivated derivatives, TnpA family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.00000000000277691 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACGACCA AGAGCGAACG ATTGACCGTC CTGTCGGACG CCGAGCAGGA AGCCCTGTAC GGCCTGCCGG ACTTCGACGA CGCCCAGCGG CTGGAATACT TGGCGTTGAC TGAAACCGAA CTGGCGCTCG CCAGCAGCCG GCCTGGTCTC CATGCCCAGG TCTATTGCAT CTTGCAGATC GGTTACTTCA AGGCCAAGCA TGCCTTCTTC CGCTTCGACT GGAGTGAGGT CGAGCACGAT TGCGCCTTCG TGCTGAGCCG CTACTTCCAC GGCGAGTCCT TCGAGCACAA GCCAATCTCC AAGCACGAGC ACTACACCCA GCGCGAGTGG ATTGCCGATC TGTTCGGCTA CCGGCCGTGG GCGGCCGAGT TCCTGGCGCA GCTCGCGCAG CAGGCCGCGC AGACCGTGCG GCGCGACGTG ATGCCGGGGT TCATCGCCGC CGAGCTGATC GTCTGGCTAA ACGAGCACAA GATCATCCGG CCCGGCTATA CCACCCTGCA AGAGCTGGTG AGCGAAGCCC TGTCCGCCGA GCGTCGGCGG CTGGCTGGCC TGCTGTCGGA AGTGTTGGAC GAATCGGCCA AGGCCGCGCT GGGTCGGCTT CTAGTGCGTG ACGACACCCT GTCGCAATTG GCGGCGCTCA AGCAGGACGC CAAGGACTTT GGCTGGCGTC AGATGGCCCG CGAACGCGAA AAGCGCGCCA CGCTGGAGCC GCTGCACCGG ATCGCCAAGG CGCTGCTGCC CAAGCTCGGC GTCTCGCAGC AGAATCTGCT GTACTACGCC AGCCTGGCGA ACTTCTACAC CGTCCACGAT CTACGCAACC TGAAGGCCGA TCAGACCTAC CTCTACCTGC TTTGCTATGC CTGGGTGCGC TACCGGCAGC TTTCCGACAA CCTGGTCGAT GCGATGGCCT ACCACATGAA GCAGTTGGAG GACGAAAGCA GTGCGGGCGC AAAGCAATCC TTTGTCGCCG AGCAGGTGCG CCGTCAGCAA GACACACCGC AGGTCGGCCG CCTGCTGTCG CTTTACATCG ACGACAGCGT GCCCGATCCC ACGCCGTTCG GCGATGTGCG CCAGCGCGCC TACAAAATCA TGCCCCGCGA TACGCTGCAA ACCACCGCGC AGCGCATGAG CGTGAAGCCG GTGAGCAAGC TGGCTTTGCA CTGGCAGGCG GTGGACGGCC TGGCTGAGCG CATCCGCCGC CATCTTCGGC CGCTGTATGT CGCGCTCGAC CTCGCTGGCA CTGATCCGGG CAGCCCGTGG CTCGTGGCGC TGGCCTGGGC CAAGGACGTG TTCGCCAAAC AGCAGCGCCT ATCGCAACGG CCGCTCGCCG AATGTCCAGC GGCCACGCTG CCGAAACGCT TGCGACCGTA CCTGCTGACC TTCGATGCCG ATGGCAAGCC GACGGACCTG CATGCCGACC GCTACGAGTT CTGGCTGTAC CGCCAGGTCA GGAAGCGCTT CCAGTCGGGT GAACTCTACC TCGACGACAG CTTGCAGCAC CGGCATTTTT CCGACGAGCT GGTTTCGCTG GATGAGAAGG CCGCCGTGCT GGCGCAGATC GACATCCCGT TCCTGCGGCA GCCACTCGAT GCCCAGCTCG ATGCGCTCGC GACCGAGCTG CGCGCTCAGT GGCTGGCCTT CAACCGCGAG CTGAAGCAGG GCAAGCTGAC GCACCTAGAA TACGACAAGG ACACGCAGAA GCTGACATGG CGCAAGCCCA AGGGCGAGAA CCAGAAGGCG CGCGAGAAGG CGTTCTACGA GCAACTGCCG TTCTGCGACG TGGCCGACGT GTTCCGCTTC GTCAACGGCC AGTGCCAGTT CCTGTCGGCG CTGACGCCTT TGCAGCCGCG CTATGCGAAG AAGGTCGCCG ACGCCGACAG CCTGATGGCG GTCATCATCG CGCAGGCGAT GAACCACGGC AACCAGGTCA TGGCACGCAC CAGCGACATC CCGTACCACG TGCTGGAGAG CGCCTACCAA CAGTACCTGC GCCACGCAAC GCTGCACGCG GCCAACGACT GCATCAGCAA CGCCATCGCC GCGCTGCCGA TCTTCCCGTA CTACTCGTTC GACCTCGATG CACTGTACGG TGCCGTCGAT GGTCAGAAAT TCGGCGTCGA GCGGCCGACC GTGAAAGCGC GCCACTCGCG CAAATACTTT GGGCGCGGCA AGGGCGTGGT CGCCTACACG CTGCTGTGCA ACCACGTGCC GCTCAACGGC TACCTGATCG GCGCGCACGA TTACGAGGCC CATCACGTGT TCGACATCTG GTATCGCAAC ACGTCGGACA TCGTGCCGAC CGCGATCACC GGCGACATGC ACAGCGTCAA CAAGGCCAAC TTCGCTATCC TGCACTGGTT CGGCCTGCGT TTCGAGCCGC GCTTCACCGA CCTTGGCGAT CAGTTGAAGG AACTCTACAG TGCCGACGAT CCGGCGCTGT ACGATCAGTG CCTGATCCGG CCGGCCGGGA GAATCGACCG CGATCTCATA GTCAGCGAGA AGCCGAACCT CGACCAGATT GTCGCCACGC TCGGACTGAA GGAGATGACG CAGGGCACGC TGATCCGCAA GCTATGCACC TACACCGCGC CGAACCCCAC GCGGCGCGCG GTGTTCGAGT TCGACAAGCT CATCCGCAGC ATCTACACGC TGCGCTACCT GCGCGATCCG CAACTGGAGC GCAACGTTCA CCGCTCACAG AACCGCATCG AGTCCTATCA CCAGCTACGC TCAACCATCG CCCAGGTCGG CGGCAAGAAG GAATTGACCG GGCGCACCGA CATCGAAATT GAGATCAGCA ACCAGTGCGC CAGGCTGATC GCCAACGCGG TCATCTTCTA CAACTCGGCC ATCCTCTCGC GGCTGCTGAT GAAGTACGAG GCGAGCGGCA ACGCCAAGGC GCACGCTCTC CTGACCCAGA TATCGCCGGC GGCCTGGCGG CACATCCTGC TGAACGGGCA TTACACCTTC CAGAGCGACG GCAAGATGAT CGACCTGGAT GCGCTCGTGG CGGGGCTGGA GCTGGGATGA
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Protein sequence | MTTKSERLTV LSDAEQEALY GLPDFDDAQR LEYLALTETE LALASSRPGL HAQVYCILQI GYFKAKHAFF RFDWSEVEHD CAFVLSRYFH GESFEHKPIS KHEHYTQREW IADLFGYRPW AAEFLAQLAQ QAAQTVRRDV MPGFIAAELI VWLNEHKIIR PGYTTLQELV SEALSAERRR LAGLLSEVLD ESAKAALGRL LVRDDTLSQL AALKQDAKDF GWRQMARERE KRATLEPLHR IAKALLPKLG VSQQNLLYYA SLANFYTVHD LRNLKADQTY LYLLCYAWVR YRQLSDNLVD AMAYHMKQLE DESSAGAKQS FVAEQVRRQQ DTPQVGRLLS LYIDDSVPDP TPFGDVRQRA YKIMPRDTLQ TTAQRMSVKP VSKLALHWQA VDGLAERIRR HLRPLYVALD LAGTDPGSPW LVALAWAKDV FAKQQRLSQR PLAECPAATL PKRLRPYLLT FDADGKPTDL HADRYEFWLY RQVRKRFQSG ELYLDDSLQH RHFSDELVSL DEKAAVLAQI DIPFLRQPLD AQLDALATEL RAQWLAFNRE LKQGKLTHLE YDKDTQKLTW RKPKGENQKA REKAFYEQLP FCDVADVFRF VNGQCQFLSA LTPLQPRYAK KVADADSLMA VIIAQAMNHG NQVMARTSDI PYHVLESAYQ QYLRHATLHA ANDCISNAIA ALPIFPYYSF DLDALYGAVD GQKFGVERPT VKARHSRKYF GRGKGVVAYT LLCNHVPLNG YLIGAHDYEA HHVFDIWYRN TSDIVPTAIT GDMHSVNKAN FAILHWFGLR FEPRFTDLGD QLKELYSADD PALYDQCLIR PAGRIDRDLI VSEKPNLDQI VATLGLKEMT QGTLIRKLCT YTAPNPTRRA VFEFDKLIRS IYTLRYLRDP QLERNVHRSQ NRIESYHQLR STIAQVGGKK ELTGRTDIEI EISNQCARLI ANAVIFYNSA ILSRLLMKYE ASGNAKAHAL LTQISPAAWR HILLNGHYTF QSDGKMIDLD ALVAGLELG
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