| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1850 |
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| Symbol | |
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| ID | 6286974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 1939838 |
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| End bp | 1941817 |
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| Gene Length | 1980 bp |
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| Protein Length | 659 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642625412 |
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| Product | copper-resistance protein, CopA family |
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| Protein accession | YP_001899418 |
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| Protein GI | 187928931 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2132] Putative multicopper oxidases |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01480] copper-resistance protein, CopA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0157941 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000000000246272 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGAACG ACTGTCTCAT GCTGAACGAC TCCCCGGGGA TTGCTATGGA GGTCCTCCTC
GCGTTCGTGA CGCAGGGGCA CAACCTTCCA ACGGGAGCAA GGATCGTGGG CGACAACACT
TCAATCGACT TGGCGCTGCG GCGCAAATTT CTACGCCAAA TGGCTGGGGC GGGCTTGGCG
GCAACGGGGG CCGGTATCGG CACGCCTGCT TCGGGGCTGC AAAGCCAGGA TCGTTCAACT
GACCTGTCCG GAACCGAATT CGCTCTGACA ATTGGGCGCA CACCCGTCAA TTTCACGGGG
CATTTACGGT ACGCGCTTAC GGTAAACGGA TCAATTCCTG CGCCCATCCT GCGTTGGAAA
CAAGGTTCCG AGGTAACGCT GCGGGTCACC AACACACTGG CCACGCAAAC TTCGATCCAC
TGGCATGGCA TCCTCGTTCC GTTTGCCATG GATGGCGTGC CTGGCGTGTC CTTTCCCGGC
ATTCCTGCTC ACCAGACCTT CGTCTACAAA TTCAAGGTCC GACAGGCCGG TACATACTGG
TACCACAGCC ACACCCGCTT TCAGGAGCAA CTCGGCCTCT ATGGCCCATT GGTGATCGAG
CCACAAAGGC CGGCCCCCAT ACCTAGCGAC AGGGACTACG TCGTTATGCT GAGTGATTGG
ACTGACGAAG ATCCTGAAAA CGTCTTCCTT CACTTGAAGC AGTCGAGTGA TTTTTACAAT
TTCCAATTAC CGACGGTCAC TGATTTTGTG GCCGACGTCA GGGCGGCGGG CCTCTCAAAA
GCACTGGCTC GACGGCGTAT GTGGAACCAG ATGCGCATGA ATCCCACGGA CCTCGCCGAT
GTCTCTGCTG CAACCTACTG CTACTTGGTC AATGGCGCCA CACCCTTCAC TAACTGGACA
GCTATCGCGG AGGCAGGCGA ATACGTACGT TTGCGCTTCA TCAATGGATC GGCCACCACA
ACGTTTGATG TTCGCATCCC GGGCCTGACC ATGCGAGTTT GTGCGGCGGA CGGACAAGAT
GTCGAACCCG TGAACGTCGA CGAGTTTCGG ATTGGTGTAG CGGAGACCTA CGATGTGTTG
GTGCAGATGC CCCGGAATGA GGCATACACC ATATTTGCAC AGGCGATGGA CCGCAGCGGA
TATGCACGTG CCACCCTCGC GCCGAAGCAC GGCATGCGGG CCGCGATTCC TATTATGGAC
CCCAAAACCT GGCTGACCAT GGCTGACATG GGCATGGACA TGAACATGAA CGGAATGTCT
ATGACCAGCG GGCCACCCAA TGAAACGATG GAAACTCAGG ACAACGGCAT CCATTCCCCC
CTCGGCCACT CTATGCAGGC GGGGGGCGAA ACCGCGGCCG ACGCCATGCC AGGCATGCGA
CTGCAGTCCG GCGATGAAGG CATGGCCGGC ATGAAACCCT CCATGTCGAT GTCCCACGAT
GGTAAGCCCG AGCATTCCCA CCCAATGACG ATGCTGGGTA TGCACGGCGG CCCCGAAGTC
GACATGCGGT CGATGAACCC TTCCAAGTCG CTCGCAGACC CTGGGCCGAG ATTGCGCCAA
AATGGCCGGA GGGTTTTGAC CTACGCAGAC TTGCGAACGC TGGGCCAGCC CTATGACGAT
CGGCCTCCGG GCCGCGAGAT CGTGTTGCAT CTGACCGGCA ACATGCGACG GTTCATCTGG
GGATTCGATG GCAAAAGGTT CTCGGAGGCC GAGCCGATCC GTCTGTACTA CGGCGAACGG
CTGCGGATCA CTCTCGTTAA TGACACCATG ATGAATCACC CTATGCACCT GCACGGGATG
TTCAGCGAGC TTGAAAACAC GGAGCGTCAA GCGCTCGTCC GTAAGCACAC CATCAACGTT
CAACCATCCA AGCAGATCAG TTTCCTCGTA ACTGCGGATG CCCCGGGCCA GTGGGCATTT
CATTGTCATC TGCTGTACCA CATGGAAGCC GGTATGTTCC GCAAGGTGGT TGTGGCCTGA
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| Protein sequence | MLNDCLMLND SPGIAMEVLL AFVTQGHNLP TGARIVGDNT SIDLALRRKF LRQMAGAGLA
ATGAGIGTPA SGLQSQDRST DLSGTEFALT IGRTPVNFTG HLRYALTVNG SIPAPILRWK
QGSEVTLRVT NTLATQTSIH WHGILVPFAM DGVPGVSFPG IPAHQTFVYK FKVRQAGTYW
YHSHTRFQEQ LGLYGPLVIE PQRPAPIPSD RDYVVMLSDW TDEDPENVFL HLKQSSDFYN
FQLPTVTDFV ADVRAAGLSK ALARRRMWNQ MRMNPTDLAD VSAATYCYLV NGATPFTNWT
AIAEAGEYVR LRFINGSATT TFDVRIPGLT MRVCAADGQD VEPVNVDEFR IGVAETYDVL
VQMPRNEAYT IFAQAMDRSG YARATLAPKH GMRAAIPIMD PKTWLTMADM GMDMNMNGMS
MTSGPPNETM ETQDNGIHSP LGHSMQAGGE TAADAMPGMR LQSGDEGMAG MKPSMSMSHD
GKPEHSHPMT MLGMHGGPEV DMRSMNPSKS LADPGPRLRQ NGRRVLTYAD LRTLGQPYDD
RPPGREIVLH LTGNMRRFIW GFDGKRFSEA EPIRLYYGER LRITLVNDTM MNHPMHLHGM
FSELENTERQ ALVRKHTINV QPSKQISFLV TADAPGQWAF HCHLLYHMEA GMFRKVVVA
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