Gene Rpic_1845 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1845 
Symbol 
ID6287582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1934499 
End bp1934990 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content56% 
IMG OID642625407 
Productputative transmembrane protein 
Protein accessionYP_001899413 
Protein GI187928926 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.298239 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000196844 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGCAAT CCTCGCATCG ACATCCCCTG AAAGGGACAG GCATTCGTCT GCATCCGTAT 
CACTATTGGG TTGCTCTCGC CGTATTGCTA GCGGTAGCGG TGTCTGGGCT GATATGGACG
GTTTTGCACG ATTTGCTTCA ATGGGAGGAC GCACCGATCG TCCGCCAGAT TCTGCAGTTG
CATGGCGCCT TTGCGTTCTG CAGCCTGATT CTCTTGGGTT CCATGCTGCC GCAACACATT
CGCTTCGCGT GGGTTGCGCG CCGAAACCTC GTGACCGGTA CGTTGACGGG AATCGTGTTC
TTGTTGCTGA CCATCACCGC TTATGGGCTG TATTACGGGC CCGAAGATTG GAGTGGTCTT
ACGAAGACTG TGCACCTTGT TCTGGGCATT GCTGCTGTTG CGGCCGTGCC CCTCCACATG
TTCATTGGAC GGAAGCGACA CAACGGCTAC CGTGCCCCCG CGAGCAAGAA TGTACGGCAC
GAAAAAACCT GA
 
Protein sequence
MTQSSHRHPL KGTGIRLHPY HYWVALAVLL AVAVSGLIWT VLHDLLQWED APIVRQILQL 
HGAFAFCSLI LLGSMLPQHI RFAWVARRNL VTGTLTGIVF LLLTITAYGL YYGPEDWSGL
TKTVHLVLGI AAVAAVPLHM FIGRKRHNGY RAPASKNVRH EKT