Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1845 |
Symbol | |
ID | 6287582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 1934499 |
End bp | 1934990 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642625407 |
Product | putative transmembrane protein |
Protein accession | YP_001899413 |
Protein GI | 187928926 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.298239 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.000000196844 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACGCAAT CCTCGCATCG ACATCCCCTG AAAGGGACAG GCATTCGTCT GCATCCGTAT CACTATTGGG TTGCTCTCGC CGTATTGCTA GCGGTAGCGG TGTCTGGGCT GATATGGACG GTTTTGCACG ATTTGCTTCA ATGGGAGGAC GCACCGATCG TCCGCCAGAT TCTGCAGTTG CATGGCGCCT TTGCGTTCTG CAGCCTGATT CTCTTGGGTT CCATGCTGCC GCAACACATT CGCTTCGCGT GGGTTGCGCG CCGAAACCTC GTGACCGGTA CGTTGACGGG AATCGTGTTC TTGTTGCTGA CCATCACCGC TTATGGGCTG TATTACGGGC CCGAAGATTG GAGTGGTCTT ACGAAGACTG TGCACCTTGT TCTGGGCATT GCTGCTGTTG CGGCCGTGCC CCTCCACATG TTCATTGGAC GGAAGCGACA CAACGGCTAC CGTGCCCCCG CGAGCAAGAA TGTACGGCAC GAAAAAACCT GA
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Protein sequence | MTQSSHRHPL KGTGIRLHPY HYWVALAVLL AVAVSGLIWT VLHDLLQWED APIVRQILQL HGAFAFCSLI LLGSMLPQHI RFAWVARRNL VTGTLTGIVF LLLTITAYGL YYGPEDWSGL TKTVHLVLGI AAVAAVPLHM FIGRKRHNGY RAPASKNVRH EKT
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