| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1839 |
|---|
| Symbol | |
|---|
| ID | 6286333 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 1928081 |
|---|
| End bp | 1929370 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642625401 |
|---|
| Product | copper resistance B precursor |
|---|
| Protein accession | YP_001899407 |
|---|
| Protein GI | 187928920 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3667] Uncharacterized protein involved in copper resistance |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.425584 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0000315743 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCACGC ATAAGCACGT TAAGACAGCA CTGGCAGTTG CCTTGGCCCT TGTCAGCATC
AGCGCCGCAT CTGCACAGGA ATCTACAGCG ACCTACGACA CCATGGCGCC AAGCTCGGGC
GCCGACACTC AGCCAGCAGC CCGCGGCTCG ATGCAGGGCA TGGACCACGG CTCGATGCAG
GGCATGGATC AGGGCTCGAT GCAGGGCATG GATCAGGGCT CGATGCAGGG CATGGATCAG
GGCTCGATGC AGGGCATGGA CCACGGCTCG ATGCAGGGCA TGGATCAGGG CTCGATGCAG
GGCATGGACC ACGGCTCGAT GCAGGGCATG GATCAGGGCT CGATGCAGGG CATGGATCAG
GGCTCGATGC AGGGCATGGA TCAGGGCTCG ATGCAGGGCA TGGACCACGG CTCGATGCAG
GGCATGGACC ACGGCTCGAT GCAGGGCATG GACCACGGCT CGATGCAGGG CATGGATCAG
GGCTCGATGC AGGGCATGGA CCACGGCTCG ATGCAGGGCA TGGACCATGG CTCGATGCAA
ATGCAAGGCG GCTCGGCGCC ACCTGATGCA CGGGATCCGA ATGCATACTC GGGTGGATAT
CAACTGGGTG TTGGCAAGTA CGCGCTGAGC AACACCCGCC AACTCATGAT GGCCGATGAA
CACAATTTCG GATCGTTCTT AATTGATCGC CTGGAGTGGG TGCGGGGGCC CAACTCCAAT
GCCGCGTCTT ATGAGGCCCA AGCGTGGTAC GGAAGCACTT ACAACAAGGT CGTACTGAAG
GCGGAAGGCG ATGTGAAAAA AGGTCGACTC GAGGAGGCGC GCACCGAGTT GCTATGGGGA
CATGCGATCA CGACGTTCTG GGACACCCAG CTTGGGATCC GGAACGACGT CGGATCGGGA
CGTCCGGCGC GGAACTGGGC GGCTTTCGGC GTGCAAGGCC TAGCGCCATA TTGGTTCAAC
ATCCAGGCCA CCGCATACGT CGGTAATAGC GGTCGCACCG CGCTGCGACT GTCCACGGAG
TATGAATTGC TGCTGAGCCA GCGTCTCATT CTACAACCAC GCGTGGAAGC CAACTTCTAT
GGGAAAAATG ATCCGGCTCT GGAGATAGGC AGCGGTCTGT CCAGCGCTAG CGTCGGCCTG
CGTTTGCGTT ACGAATTCAG CCGGCAGTTC GCGCCTTACA TCGGCGTCGA GCGGTACCAG
ACTTTTGGCA ACACCGCCAA CATGATTCGG GCCGATGGCG GCCGAAGCGG TGAGACCCGA
TTTGTGGCGG GCCTGCGCGT TTGGTACTAA
|
|---|
| Protein sequence | MTTHKHVKTA LAVALALVSI SAASAQESTA TYDTMAPSSG ADTQPAARGS MQGMDHGSMQ
GMDQGSMQGM DQGSMQGMDQ GSMQGMDHGS MQGMDQGSMQ GMDHGSMQGM DQGSMQGMDQ
GSMQGMDQGS MQGMDHGSMQ GMDHGSMQGM DHGSMQGMDQ GSMQGMDHGS MQGMDHGSMQ
MQGGSAPPDA RDPNAYSGGY QLGVGKYALS NTRQLMMADE HNFGSFLIDR LEWVRGPNSN
AASYEAQAWY GSTYNKVVLK AEGDVKKGRL EEARTELLWG HAITTFWDTQ LGIRNDVGSG
RPARNWAAFG VQGLAPYWFN IQATAYVGNS GRTALRLSTE YELLLSQRLI LQPRVEANFY
GKNDPALEIG SGLSSASVGL RLRYEFSRQF APYIGVERYQ TFGNTANMIR ADGGRSGETR
FVAGLRVWY
|
|---|
| |